RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 PPIBP23284 216 aaKnown RBP10.52□□□□□ -0.73
MED28-203ENST00000503945 MRPL19P49406 292 aaKnown RBP10.52□□□□□ -0.73
MED28-203ENST00000503945 ZNF83P51522 516 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 AQP5P55064 265 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 IRX1P78414 480 aaPredicted RBP10.52□□□□□ -0.73
MED28-203ENST00000503945 BNIP2Q12982 314 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 ETFDHQ16134 617 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 CLEC12BQ2HXU8 276 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 RPS26P11Q5JNZ5 115 aaPredicted RBP10.52□□□□□ -0.73
MED28-203ENST00000503945 C1QTNF12Q5T7M4 302 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 RNF220Q5VTB9 566 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 AGAP6Q5VW22 663 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 SLC22A25Q6T423 547 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 ABHD12BQ7Z5M8 362 aaPredicted RBP10.52□□□□□ -0.73
MED28-203ENST00000503945 ATG4DQ86TL0 474 aaPredicted RBP10.52□□□□□ -0.73
MED28-203ENST00000503945 POMGNT2Q8NAT1 580 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 OR52E4Q8NGH9 312 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 SPATA3Q8NHX4 192 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 BBS10Q8TAM1 723 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 MAL2Q969L2 176 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 SLC35B4Q969S0 331 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 SPDL1Q96EA4 605 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 SPATA5L1Q9BVQ7 753 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 C1QTNF6Q9BXI9 259 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 RABEP2Q9H5N1 569 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 A4GALTQ9NPC4 353 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 SLCO1B3Q9NPD5 702 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 TMEM45AQ9NWC5 275 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 CCDC167Q9P0B6 97 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 RPS6KB2Q9UBS0 482 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 MALT1Q9UDY8 824 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 POU2F3Q9UKI9 436 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 SLC25A15Q9Y619 301 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 DSPPQ9NZW4 1301 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 COL6A5A8TX70 2615 aa10.52□□□□□ -0.73
MED28-203ENST00000503945 A0A1W2PR80 420 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 EVPLLA8MZ36 301 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 SHISA9B4DS77 424 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 SERPINB7O75635 380 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 NUDT7P0C024 238 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 BMP2P12643 396 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 PRG2P13727 222 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 CD40P25942 277 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 MPGP29372 298 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 PRPS1P60891 318 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 TNK1Q13470 666 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 PGGHGQ32M88 737 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 TSPO2Q5TGU0 170 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 C9orf135Q5VTT2 229 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 C1orf140Q5VVS0 124 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 REEP3Q6NUK4 255 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 SEZ6L2Q6UXD5 910 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 HDXQ7Z353 690 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 SERPINA11Q86U17 422 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 KRT73Q86Y46 540 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 FUNDC1Q8IVP5 155 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 ZIC4Q8N9L1 334 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 KBTBD8Q8NFY9 601 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 OR9K2Q8NGE7 335 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 STK35Q8TDR2 534 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 TMEM45BQ96B21 275 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 SLC25A36Q96CQ1 311 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 EBF4Q9BQW3 602 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 GRIP2Q9C0E4 1043 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 SLC7A10Q9NS82 523 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 INTS9Q9NV88 658 aaKnown RBP10.51□□□□□ -0.73
MED28-203ENST00000503945 SLAMF8Q9P0V8 285 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 DCTN4Q9UJW0 460 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 CORO2BQ9UQ03 480 aa10.51□□□□□ -0.73
MED28-203ENST00000503945 MAGED1Q9Y5V3 778 aaPredicted RBP10.51□□□□□ -0.73
MED28-203ENST00000503945 OR6C65A6NJZ3 312 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 AQP7P3A6NL99 342 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 ELOA3DA6NLF2 546 aaPredicted RBP10.5□□□□□ -0.73
MED28-203ENST00000503945 M0R1B8 84 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 PDLIM1O00151 329 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 NR5A2O00482 541 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 OR2T1O43869 369 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 AHSA1O95433 338 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 WNT11O96014 354 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 CD8AP01732 235 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 ITGA5P08648 1049 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 BMP4P12644 408 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 CDH2P19022 906 aaPredicted RBP10.5□□□□□ -0.73
MED28-203ENST00000503945 PAX7P23759 505 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 SLC6A2P23975 617 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 CDKN1AP38936 164 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 FABP6P51161 128 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 HOXC5Q00444 222 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 CDK6Q00534 326 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 ELOA3BQ3SY89 546 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 AGKQ53H12 422 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 LRIF1Q5T3J3 769 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 GCNT6Q5T4J0 391 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 CREB3L2Q70SY1 520 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 NET1Q7Z628 596 aaPredicted RBP10.5□□□□□ -0.73
MED28-203ENST00000503945 C17orf78Q8N4C9 275 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 WDR31Q8NA23 367 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 C1orf162Q8NEQ5 155 aaPredicted RBP10.5□□□□□ -0.73
MED28-203ENST00000503945 ELOA3Q8NG57 546 aa10.5□□□□□ -0.73
MED28-203ENST00000503945 MFSD8Q8NHS3 518 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms