RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 WDR60Q8WVS4 1066 aa11.3□□□□□ -0.6
TRIO-205ENST00000503399 NEU4Q8WWR8 484 aaPredicted RBP11.3□□□□□ -0.6
TRIO-205ENST00000503399 TUBGCP3Q96CW5 907 aa11.3□□□□□ -0.6
TRIO-205ENST00000503399 ZG16BQ96DA0 208 aa11.3□□□□□ -0.6
TRIO-205ENST00000503399 MECRQ9BV79 373 aa11.3□□□□□ -0.6
TRIO-205ENST00000503399 SEC61A2Q9H9S3 476 aa11.3□□□□□ -0.6
TRIO-205ENST00000503399 EXOSC3Q9NQT5 275 aaKnown RBP11.3□□□□□ -0.6
TRIO-205ENST00000503399 POLE3Q9NRF9 147 aa11.3□□□□□ -0.6
TRIO-205ENST00000503399 PCDHB14Q9Y5E9 798 aa11.3□□□□□ -0.6
TRIO-205ENST00000503399 ZNF208O43345 1280 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 NPHS1O60500 1241 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 CPSF4O95639 269 aaKnown RBP11.29□□□□□ -0.6
TRIO-205ENST00000503399 SHBGP04278 402 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 GPIP06744 558 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 ALDH3A1P30838 453 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 THBS4P35443 961 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 KHKP50053 298 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 DVL1P1P54792 670 aaPredicted RBP11.29□□□□□ -0.6
TRIO-205ENST00000503399 PLAURQ03405 335 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 FUT5Q11128 374 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 ADRM1Q16186 407 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 ZCCHC23Q6ZST2 131 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 GLCCI1Q86VQ1 547 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 ANKRD46Q86W74 232 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 ZIC4Q8N9L1 334 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 OR4F15Q8NGB8 312 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 UBASH3BQ8TF42 649 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 OIT3Q8WWZ8 545 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 TPK1Q9H3S4 243 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 NARFLQ9H6Q4 476 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 FBXO9Q9UK97 447 aaPredicted RBP11.29□□□□□ -0.6
TRIO-205ENST00000503399 TENM1Q9UKZ4 2725 aa11.29□□□□□ -0.6
TRIO-205ENST00000503399 VSTM5A8MXK1 200 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 LYNX1G3V0Z9 82 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 CELA3BP08861 270 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 LYNX1P0DP58 116 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 UQCRBP14927 111 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 NPR2P20594 1047 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 CHI3L1P36222 383 aaPredicted RBP11.28□□□□□ -0.6
TRIO-205ENST00000503399 SELENOPP49908 381 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 IL1RL1Q01638 556 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 TMEM225Q6GV28 225 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 NIPAL3Q6P499 406 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 SHQ1Q6PI26 577 aaKnown RBP11.28□□□□□ -0.6
TRIO-205ENST00000503399 UGT2A3Q6UWM9 527 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 CDK20Q8IZL9 346 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 ZNF786Q8N393 782 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 SEMA6DQ8NFY4 1073 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 MIPOL1Q8TD10 442 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 EPS8L3Q8TE67 593 aaKnown RBP11.28□□□□□ -0.6
TRIO-205ENST00000503399 BCL2L2Q92843 193 aaPredicted RBP11.28□□□□□ -0.6
TRIO-205ENST00000503399 GCDHQ92947 438 aaPredicted RBP11.28□□□□□ -0.6
TRIO-205ENST00000503399 ZMYND19Q96E35 227 aaPredicted RBP11.28□□□□□ -0.6
TRIO-205ENST00000503399 SF3B5Q9BWJ5 86 aaKnown RBP11.28□□□□□ -0.6
TRIO-205ENST00000503399 TXLNGYQ9BZA5 131 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 SAP130Q9H0E3 1048 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 LPAR2Q9HBW0 351 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 ADPRHL2Q9NX46 363 aa11.28□□□□□ -0.6
TRIO-205ENST00000503399 ARPC4-TTLL3A0A0A6YYG9 625 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 A0A0A6YYJ9 748 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 OR6C65A6NJZ3 312 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 LIPT2A6NK58 231 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 AQP7P3A6NL99 342 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 SLCO1B7G3V0H7 640 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 RNASET2O00584 256 aaKnown RBP11.27□□□□□ -0.61
TRIO-205ENST00000503399 KCNAB3O43448 404 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 ADRA2AP08913 450 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 EGR1P18146 543 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 UQCRC2P22695 453 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 CXCR1P25024 350 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 CLDN8P56748 225 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 HGFACQ04756 655 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 NPRL3Q12980 569 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 MAD2L1Q13257 205 aaPredicted RBP11.27□□□□□ -0.61
TRIO-205ENST00000503399 RIN1Q13671 783 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 THSD4Q6ZMP0 1018 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 LINGO2Q7L985 606 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 MYPOPQ86VE0 399 aaPredicted RBP11.27□□□□□ -0.61
TRIO-205ENST00000503399 NUP37Q8NFH4 326 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 ZNF418Q8TF45 676 aaPredicted RBP11.27□□□□□ -0.61
TRIO-205ENST00000503399 ZFAND2BQ8WV99 257 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 UBLCP1Q8WVY7 318 aaPredicted RBP11.27□□□□□ -0.61
TRIO-205ENST00000503399 CKAP2Q8WWK9 683 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 BOD1Q96IK1 185 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 PPP1R36Q96LQ0 422 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 ANKRD27Q96NW4 1050 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 DOK1Q99704 481 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 TAPBPLQ9BX59 468 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 ZNF442Q9H7R0 627 aa11.27□□□□□ -0.61
TRIO-205ENST00000503399 NOP53Q9NZM5 478 aaKnown RBP11.27□□□□□ -0.61
TRIO-205ENST00000503399 CRNNQ9UBG3 495 aaPredicted RBP11.27□□□□□ -0.61
TRIO-205ENST00000503399 MARCOQ9UEW3 520 aaPredicted RBP11.27□□□□□ -0.61
TRIO-205ENST00000503399 CFAP73A6NFT4 308 aa11.26□□□□□ -0.61
TRIO-205ENST00000503399 B4DSR2 109 aa11.26□□□□□ -0.61
TRIO-205ENST00000503399 UPK3AO75631 287 aa11.26□□□□□ -0.61
TRIO-205ENST00000503399 IGLV1-44P01699 117 aa11.26□□□□□ -0.61
TRIO-205ENST00000503399 GUSBP08236 651 aa11.26□□□□□ -0.61
TRIO-205ENST00000503399 PAX7P23759 505 aa11.26□□□□□ -0.61
TRIO-205ENST00000503399 ROR2Q01974 943 aaKnown RBP11.26□□□□□ -0.61
TRIO-205ENST00000503399 BNIP2Q12982 314 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms