RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 RAC1P63000 192 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 ARG2P78540 354 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 FOXK2Q01167 660 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 MVKQ03426 396 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 APOFQ13790 326 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 KLHL22Q53GT1 634 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 ALG10Q5BKT4 473 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 NXNL2Q5VZ03 156 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 SPINK14Q6IE38 97 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 SLC25A25Q6KCM7 469 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 POMZP3Q6PJE2 187 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 IGFL2Q6UWQ7 119 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 PRSS48Q7RTY5 328 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 IQCF1Q8N6M8 205 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 FAM98AQ8NCA5 519 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 ADPRHL1Q8NDY3 354 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 C9orf43Q8TAL5 461 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 APH1BQ8WW43 257 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 TAAR8Q969N4 342 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 LRR1Q96L50 414 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 PTDSS2Q9BVG9 487 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 DUSP21Q9H596 190 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 ZNF552Q9H707 407 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 NRIP3Q9NQ35 241 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 ANKRD10Q9NXR5 420 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 ALKBH4Q9NXW9 302 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 PSORS1C1Q9UIG5 152 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 B3GALT5Q9Y2C3 310 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 PCDHGB5Q9Y5G0 923 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 PCDHGB1Q9Y5G3 927 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 FRYLO94915 3013 aa7.35□□□□□ -1.23
TOPBP1-202ENST00000503338 NPIPB13A6NJU9 1138 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 C17orf51A8MQB3 221 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 KDM4EB2RXH2 506 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 NPIPB4C9JG80 1138 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 PTGES3LE9PB15 166 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 PRR23D1E9PI22 279 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 BLOC1S5-TXNDC5H3BN57 136 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 ACOT7O00154 380 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 RRP8O43159 456 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 RGS10O43665 173 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 PRKYO43930 277 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 NME2P1O60361 137 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 EIF1BO60739 113 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 CEACAM4O75871 244 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 PMS2P2O95744 297 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 TXNDC12O95881 172 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 SP1P08047 785 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 IGFBP1P08833 259 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 SMIM18P0DKX4 95 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 PRR23D2P0DMB1 279 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 CCNA2P20248 432 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 PTNP21246 168 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 NME2P22392 152 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 SDHAP31040 664 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 UQCRC1P31930 480 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 DNASE1L1P49184 302 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 CCL11P51671 97 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 FXYD6P3P58550 94 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 CSNK2A1P68400 391 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 SLC35A2P78381 396 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 LGALS3BPQ08380 585 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 RAB40BQ12829 278 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 ZP4Q12836 540 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 PMS2P3Q13401 168 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 FHL1Q13642 323 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 HYAL4Q2M3T9 481 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 PDSS1Q5T2R2 415 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 ATP1A1-AS1Q5TC04 95 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 RAET1LQ5VY80 246 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 FAM205BPQ63HN1 556 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 LAIR2Q6ISS4 152 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 THSD4Q6ZMP0 1018 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 LINC00696Q6ZRV3 163 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 H1FNTQ75WM6 255 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 HDDC2Q7Z4H3 204 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 SLC22A16Q86VW1 577 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 JAZF1Q86VZ6 243 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 ZNF227Q86WZ6 799 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 MEX3DQ86XN8 651 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 CCDC103Q8IW40 242 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 STX19Q8N4C7 294 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 MDS2Q8NDY4 140 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 ANKK1Q8NFD2 765 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 OR2M7Q8NG81 312 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 OR4Q3Q8NH05 313 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 POC1BQ8TC44 478 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 FCGR1BQ92637 280 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 ZNF524Q96C55 264 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 ZHX1-C8orf76Q96EF9 292 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 ZNF582Q96NG8 517 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 GNRHR2Q96P88 292 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 MOGAT1Q96PD6 335 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 ERMAPQ96PL5 475 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 SNX18Q96RF0 628 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 IL4I1Q96RQ9 567 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 MYCBPQ99417 103 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 SMAD5Q99717 465 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 KLHDC3Q9BQ90 382 aa7.34□□□□□ -1.23
TOPBP1-202ENST00000503338 TUBA1CQ9BQE3 449 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms