RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 NUDT14O95848 222 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 CCDC172P0C7W6 258 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 KLK2P20151 261 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 HNRNPA2B1P22626 353 aaKnown RBP4.28□□□□□ -1.72
NIPBL-203ENST00000503274 UCP1P25874 307 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 MAT2AP31153 395 aaKnown RBP4.28□□□□□ -1.72
NIPBL-203ENST00000503274 CHRNA3P32297 505 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 SULT1E1P49888 294 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 DUSP3P51452 185 aaPredicted RBP4.28□□□□□ -1.72
NIPBL-203ENST00000503274 ARHGDIAP52565 204 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 RPS21P63220 83 aaKnown RBP4.28□□□□□ -1.72
NIPBL-203ENST00000503274 IL9RQ01113 521 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 RAD51Q06609 339 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 NPRL3Q12980 569 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 EIF4EBP2Q13542 120 aaPredicted RBP4.28□□□□□ -1.72
NIPBL-203ENST00000503274 SYCP1Q15431 976 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 PPP1R3AQ16821 1122 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 HKDC1Q2TB90 917 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 PTPN20Q4JDL3 420 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 TCHHL1Q5QJ38 904 aaPredicted RBP4.28□□□□□ -1.72
NIPBL-203ENST00000503274 UTF1Q5T230 341 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 TAF3Q5VWG9 929 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 FAM183BPQ6ZVS7 135 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 ARCQ7LC44 396 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 LUZP1Q86V48 1076 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 HORMAD1Q86X24 394 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 ZNF677Q86XU0 584 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 EID2Q8N6I1 236 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 DCAF4L2Q8NA75 395 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 NPY6RQ99463 290 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 ABCG4Q9H172 646 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 ADGRL4Q9HBW9 690 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 ACP6Q9NPH0 428 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 XPO7Q9UIA9 1087 aaKnown RBP4.28□□□□□ -1.72
NIPBL-203ENST00000503274 EMCNQ9ULC0 261 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 HS3ST2Q9Y278 367 aa4.28□□□□□ -1.72
NIPBL-203ENST00000503274 ATMQ13315 3056 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 SETXQ7Z333 2677 aaKnown RBP4.27□□□□□ -1.73
NIPBL-203ENST00000503274 FAM168BA1KXE4 195 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 GOLGA8SH3BPF8 625 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 SAP18O00422 153 aaKnown RBP4.27□□□□□ -1.73
NIPBL-203ENST00000503274 APRTP07741 180 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 HIST1H2AGP0C0S8 130 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-203ENST00000503274 DNAH10OSP0CZ25 163 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 UCHL3P15374 230 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 AREGP15514 252 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 CYP11B1P15538 503 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 SDC4P31431 198 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 CDH5P33151 784 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-203ENST00000503274 DRD3P35462 400 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 TRIM23P36406 574 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 CCZ1BP86790 482 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 CCZ1P86791 482 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-203ENST00000503274 GALK2Q01415 458 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 TSTA3Q13630 321 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-203ENST00000503274 CARD16Q5EG05 197 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 RWDD4Q6NW29 188 aaKnown RBP4.27□□□□□ -1.73
NIPBL-203ENST00000503274 PPP1R2P3Q6NXS1 205 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-203ENST00000503274 OR2A12Q8NGT7 310 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 ZNF671Q8TAW3 534 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 KRT35Q92764 455 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 HIST1H2ACQ93077 130 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 NT5C3BQ969T7 300 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 RAB7BQ96AH8 199 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 FAM131CQ96AQ9 280 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 ISG20Q96AZ6 181 aaKnown RBP4.27□□□□□ -1.73
NIPBL-203ENST00000503274 SLCO4A1Q96BD0 722 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 CALN1Q9BXU9 219 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 ZYG11BQ9C0D3 744 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 CLSTN2Q9H4D0 955 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 MID1IP1Q9NPA3 183 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 OR12D3Q9UGF7 316 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 IKZF3Q9UKT9 509 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 SLC9A8Q9Y2E8 581 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 OR51B4Q9Y5P0 310 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 SLCO1B1Q9Y6L6 691 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 SPTA1P02549 2419 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 TRPM6Q9BX84 2022 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 PTPRQQ9UMZ3 2332 aa4.27□□□□□ -1.73
NIPBL-203ENST00000503274 PTPRBP23467 1997 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 A0A0D9SEW6 157 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 F8VZ95 297 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 CALB1P05937 261 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 GP1BAP07359 652 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 ACP1P24666 158 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 RABIFP47224 123 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 ACADVLP49748 655 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 NUMBP49757 651 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 CNN1P51911 297 aaKnown RBP4.26□□□□□ -1.73
NIPBL-203ENST00000503274 AIF1P55008 147 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 POLR2FP61218 127 aaKnown RBP4.26□□□□□ -1.73
NIPBL-203ENST00000503274 ARF5P84085 180 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 SEMG2Q02383 582 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 GNA12Q03113 381 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 RPA4Q13156 261 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 C2orf76Q3KRA6 126 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 PRR30Q53SZ7 412 aaPredicted RBP4.26□□□□□ -1.73
NIPBL-203ENST00000503274 HSP90AA4PQ58FG1 418 aa4.26□□□□□ -1.73
NIPBL-203ENST00000503274 PIP5KL1Q5T9C9 394 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms