RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CALML5Q9NZT1 146 aa14.28□□□□□ -0.12
SCLT1-204ENST00000503215 RRP15Q9Y3B9 282 aaKnown RBP14.28□□□□□ -0.12
SCLT1-204ENST00000503215 A0A0G2JPF8 293 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 HNRNPCL2B2RXH8 293 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 HNRNPCL3B7ZW38 293 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 E7EQL1 145 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 EIF1BO60739 113 aaKnown RBP14.27□□□□□ -0.12
SCLT1-204ENST00000503215 HNRNPCL1O60812 293 aaKnown RBP14.27□□□□□ -0.12
SCLT1-204ENST00000503215 TMCC2O75069 709 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 IGHV4-39P01824 125 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 THBS1P07996 1170 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 HNRNPCL4P0DMR1 293 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 IDUAP35475 653 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 ACVR1BP36896 505 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 CDH11P55287 796 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 KRTAP1-1Q07627 177 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 LARS2Q15031 903 aaKnown RBP14.27□□□□□ -0.12
SCLT1-204ENST00000503215 CLEC12BQ2HXU8 276 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 TTMPQ5BVD1 217 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 RNF220Q5VTB9 566 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 WBP2NLQ6ICG8 309 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 B3GLCTQ6Y288 498 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 OR9K2Q8NGE7 335 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 C7orf26Q96N11 449 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 PRR14Q9BWN1 585 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 SPATA9Q9BWV2 254 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 TCF7L2Q9NQB0 619 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 ADPRHL2Q9NX46 363 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 SLC9A8Q9Y2E8 581 aa14.27□□□□□ -0.12
SCLT1-204ENST00000503215 SONP18583 2426 aaKnown RBP14.27□□□□□ -0.13
SCLT1-204ENST00000503215 AQP7P3A6NL99 342 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 FAM171A2A8MVW0 826 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 INAFM1C9JVW0 142 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 RNF223E7ERA6 249 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 M0R1B8 84 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 GPIP06744 558 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 BMP2P12643 396 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 UQCRBP14927 111 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 CD40P25942 277 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 VEZF1Q14119 521 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 HSP90B2PQ58FF3 399 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 ZNF311Q5JNZ3 666 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 PAGE3Q5JUK9 113 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 BLOC1S3Q6QNY0 202 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 PRIMA1Q86XR5 153 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 C3orf49Q96BT1 292 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 AMBRA1Q9C0C7 1298 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 SLCO5A1Q9H2Y9 848 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 IKZF5Q9H5V7 419 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 BCL2L10Q9HD36 194 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 A4GALTQ9NPC4 353 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 UPB1Q9UBR1 384 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 ZNF232Q9UNY5 417 aa14.26□□□□□ -0.13
SCLT1-204ENST00000503215 A0A096LPI6 279 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 A8MVM7 634 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 NR5A2O00482 541 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 NPIPB7O75200 414 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 CDH2P19022 906 aaPredicted RBP14.25□□□□□ -0.13
SCLT1-204ENST00000503215 NCF2P19878 526 aaPredicted RBP14.25□□□□□ -0.13
SCLT1-204ENST00000503215 MRPL19P49406 292 aaKnown RBP14.25□□□□□ -0.13
SCLT1-204ENST00000503215 MAP2K6P52564 334 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 COPZ1P61923 177 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 C1orf140Q5VVS0 124 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 AAED1Q7RTV5 226 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 GPAT4Q86UL3 456 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 DTX2Q86UW9 622 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 KDM8Q8N371 416 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 NFKBIDQ8NI38 313 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 TMEM45BQ96B21 275 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 TRMT61AQ96FX7 289 aaKnown RBP14.25□□□□□ -0.13
SCLT1-204ENST00000503215 PARPBPQ9NWS1 579 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 CCDC167Q9P0B6 97 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 VAPAQ9P0L0 249 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 B3GALT5Q9Y2C3 310 aa14.25□□□□□ -0.13
SCLT1-204ENST00000503215 ABCA1O95477 2261 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 TMEM229AB2RXF0 380 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 TPST1O60507 370 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 AQP5P55064 265 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 IRX1P78414 480 aaPredicted RBP14.24□□□□□ -0.13
SCLT1-204ENST00000503215 EGR4Q05215 589 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 LRIF1Q5T3J3 769 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 SLC22A25Q6T423 547 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 LINGO2Q7L985 606 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 EPHX4Q8IUS5 362 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 LRRC8CQ8TDW0 803 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 HTRA1Q92743 480 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 SPDL1Q96EA4 605 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 THOC1Q96FV9 657 aaKnown RBP14.24□□□□□ -0.13
SCLT1-204ENST00000503215 ATP6V1G3Q96LB4 118 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 WFDC6Q9BQY6 131 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 PTDSS2Q9BVG9 487 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 SF3B5Q9BWJ5 86 aaKnown RBP14.24□□□□□ -0.13
SCLT1-204ENST00000503215 SLC17A5Q9NRA2 495 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 THUMPD1Q9NXG2 353 aaKnown RBP14.24□□□□□ -0.13
SCLT1-204ENST00000503215 SEC14L4Q9UDX3 406 aa14.24□□□□□ -0.13
SCLT1-204ENST00000503215 HEATR1Q9H583 2144 aaKnown RBP14.24□□□□□ -0.13
SCLT1-204ENST00000503215 TRBV5-3A0A0A0MS03 114 aa14.23□□□□□ -0.13
SCLT1-204ENST00000503215 FTCDNL1E5RQL4 147 aa14.23□□□□□ -0.13
SCLT1-204ENST00000503215 TGDSO95455 350 aa14.23□□□□□ -0.13
SCLT1-204ENST00000503215 PTAFRP25105 342 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms