RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 CEACAM7Q14002 265 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 OR7A5Q15622 319 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 COX20Q5RI15 118 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 MRPL2Q5T653 305 aaKnown RBP9.42□□□□□ -0.9
SNCA-207ENST00000502987 CXXC5Q7LFL8 322 aaKnown RBP9.42□□□□□ -0.9
SNCA-207ENST00000502987 AAED1Q7RTV5 226 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 GPAT4Q86UL3 456 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 LSRQ86X29 649 aaPredicted RBP9.42□□□□□ -0.9
SNCA-207ENST00000502987 ZNF440Q8IYI8 595 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 MREGQ8N565 214 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 MGARPQ8TDB4 240 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 NANOS1Q8WY41 292 aaKnown RBP9.42□□□□□ -0.9
SNCA-207ENST00000502987 KCNS3Q9BQ31 491 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 TAPBPLQ9BX59 468 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 PARD6BQ9BYG5 372 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 GRIP2Q9C0E4 1043 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 WDR55Q9H6Y2 383 aaPredicted RBP9.42□□□□□ -0.9
SNCA-207ENST00000502987 SLC7A10Q9NS82 523 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 AIG1Q9NVV5 245 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 RLIMQ9NVW2 624 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 ADPRHL2Q9NX46 363 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 ZNF232Q9UNY5 417 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 AMDHD2Q9Y303 409 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 FLVCR1Q9Y5Y0 555 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 PMF1-BGLAPU3KQ54 211 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 IGHV4-30-2A0A087WSY4 118 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 ZC3H12DA2A288 527 aaKnown RBP9.41□□□□□ -0.9
SNCA-207ENST00000502987 TMEM247A6NEH6 219 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 SDHDO14521 159 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 GPRIN2O60269 458 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 WNT11O96014 354 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 EPHA3P29320 983 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 IL12AP29459 219 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 MAP2K6P52564 334 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 H3F3AP84243 136 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 EPS8Q12929 822 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 BNIP2Q12982 314 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 MPP2Q14168 576 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 GSTA3Q16772 222 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 CHRFAM7AQ494W8 412 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 TSPO2Q5TGU0 170 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 OGFOD2Q6N063 350 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 PODNL1Q6PEZ8 512 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 PAQR6Q6TCH4 344 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 ABHD12BQ7Z5M8 362 aaPredicted RBP9.41□□□□□ -0.9
SNCA-207ENST00000502987 CROCCP2Q86T23 111 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 VRK2Q86Y07 508 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 LRRC34Q8IZ02 419 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 SVOPQ8N4V2 548 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 TMEM99Q8N816 258 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 WDR31Q8NA23 367 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 OR52P1PQ8NH57 321 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 AURKBQ96GD4 344 aaPredicted RBP9.41□□□□□ -0.9
SNCA-207ENST00000502987 SLC17A5Q9NRA2 495 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 CALML5Q9NZT1 146 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 P2RX2Q9UBL9 471 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 MALT1Q9UDY8 824 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 DCTN4Q9UJW0 460 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 ATRQ13535 2644 aa9.41□□□□□ -0.9
SNCA-207ENST00000502987 RNF212BA8MTL3 300 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 KLF11O14901 512 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 HDAC3O15379 428 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 SLC22A3O75751 556 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 IL6P05231 212 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 BCHEP06276 602 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 ETFAP13804 333 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 MPGP29372 298 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 APOBEC3AP31941 199 aaPredicted RBP9.4□□□□□ -0.9
SNCA-207ENST00000502987 SLC17A1Q14916 467 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 LARS2Q15031 903 aaKnown RBP9.4□□□□□ -0.9
SNCA-207ENST00000502987 CARTPTQ16568 116 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 LIN52Q52LA3 116 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 AP1ARQ63HQ0 302 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 ATG16L1Q676U5 607 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 WBP2NLQ6ICG8 309 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 ZNF544Q6NX49 715 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 B3GLCTQ6Y288 498 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 HIPK1Q86Z02 1210 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 C17orf78Q8N4C9 275 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 ZNF525Q8N782 197 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 POMGNT2Q8NAT1 580 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 GLB1L3Q8NCI6 653 aaPredicted RBP9.4□□□□□ -0.9
SNCA-207ENST00000502987 C1orf162Q8NEQ5 155 aaPredicted RBP9.4□□□□□ -0.9
SNCA-207ENST00000502987 OR9K2Q8NGE7 335 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 SPATA3Q8NHX4 192 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 FAM168AQ92567 244 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 FBXO17Q96EF6 278 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 ADAM19Q9H013 955 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 ARMC7Q9H6L4 198 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 RMND5AQ9H871 391 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 MANSC1Q9H8J5 431 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 THAP1Q9NVV9 213 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 TMEM45AQ9NWC5 275 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 HAO1Q9UJM8 370 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 MOKQ9UQ07 419 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 GPR45Q9Y5Y3 372 aa9.4□□□□□ -0.9
SNCA-207ENST00000502987 YLPM1P49750 1951 aaKnown RBP9.4□□□□□ -0.9
SNCA-207ENST00000502987 SLC35F4A4IF30 521 aa9.39□□□□□ -0.91
SNCA-207ENST00000502987 LIPT2A6NK58 231 aa9.39□□□□□ -0.91
SNCA-207ENST00000502987 A8MVM7 634 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms