RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 IDH3GP51553 393 aaPredicted RBP5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 P2RY4P51582 365 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 FOXG1P55316 489 aaPredicted RBP5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 OR2B6P58173 313 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 SNRPD2P62316 118 aaKnown RBP5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 RPS26P62854 115 aaKnown RBP5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC25A3Q00325 362 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 CHRNEQ04844 493 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 PGS1Q32NB8 556 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 KRTAP24-1Q3LI83 254 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 FAM120AOSQ5T036 256 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 PRAMEF8Q5VWM4 474 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 PRAMEF7Q5VXH5 474 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 LIPNQ5VXI9 398 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 WBP2NLQ6ICG8 309 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 ANKRD16Q6P6B7 361 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 C6orf89Q6UWU4 347 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 CASP12Q6UXS9 341 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 ZCCHC23Q6ZST2 131 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 MSANTD1Q6ZTZ1 278 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 CREB3L2Q70SY1 520 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF627Q7L945 461 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 CCDC103Q8IW40 242 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 OR9K2Q8NGE7 335 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 OR52E4Q8NGH9 312 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 OR1K1Q8NGR3 316 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 STK35Q8TDR2 534 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 WDR60Q8WVS4 1066 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF775Q96BV0 537 aaPredicted RBP5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC38A2Q96QD8 506 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC35A5Q9BS91 424 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 MECRQ9BV79 373 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 PRR14Q9BWN1 585 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 OR11A1Q9GZK7 315 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 RAB1BQ9H0U4 201 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 DENND2DQ9H6A0 471 aaPredicted RBP5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 MEAF6Q9HAF1 191 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 SLC17A7Q9P2U7 560 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 MARCOQ9UEW3 520 aaPredicted RBP5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 GIMAP2Q9UG22 337 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 RASD1Q9Y272 281 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 PCDHB14Q9Y5E9 798 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 GMEB1Q9Y692 573 aa5.32□□□□□ -1.56
LSM3P4-201ENST00000502948 IGHV1-18A0A0C4DH31 117 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 CCDC154A6NI56 674 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 TMEM229AB2RXF0 380 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF587BE7ETH6 402 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ATP6V1G2-DDX39BF2Z307 99 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 OR2T1O43869 369 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 BCAS1O75363 584 aaPredicted RBP5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF432O94892 652 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 KRT75O95678 551 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 IGHV3-9P01782 118 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 SERPINE1P05121 402 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 IL6P05231 212 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ERCC1P07992 297 aaPredicted RBP5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 TFPTP0C1Z6 253 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 BMP2P12643 396 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 APEHP13798 732 aaKnown RBP5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 CBR1P16152 277 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 CXCR1P25024 350 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 S100A3P33764 101 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 RYKP34925 604 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 CHI3L1P36222 383 aaPredicted RBP5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ARR3P36575 388 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ACAA2P42765 397 aaKnown RBP5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 CHN2P52757 468 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 MVDP53602 400 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ABCE1P61221 599 aaKnown RBP5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 NAAAQ02083 359 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 MAPK11Q15759 364 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ADIPOQQ15848 244 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 TBRG1Q3YBR2 411 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 FAM174BQ3ZCQ3 159 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 GPAT3Q53EU6 434 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 TNFAIP8L3Q5GJ75 292 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 SPANXN4Q5MJ08 99 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 OTUD3Q5T2D3 398 aaPredicted RBP5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 MRPL2Q5T653 305 aaKnown RBP5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 TMEM225Q6GV28 225 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 TNFAIP8L2Q6P589 184 aaPredicted RBP5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 AAED1Q7RTV5 226 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 SPATA19Q7Z5L4 167 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 NET1Q7Z628 596 aaPredicted RBP5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 NUDCD3Q8IVD9 361 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 PEX5LQ8IYB4 626 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 GSPT2Q8IYD1 628 aaKnown RBP5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF786Q8N393 782 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 MREGQ8N565 214 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF781Q8N8C0 355 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 LSMEM1Q8N8F7 131 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 OR6S1Q8NH40 331 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 MFSD8Q8NHS3 518 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 CNOT9Q92600 299 aaKnown RBP5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 BCL2L2Q92843 193 aaPredicted RBP5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 RAB8BQ92930 207 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 MSI2Q96DH6 328 aaKnown RBP5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 LRR1Q96L50 414 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ANKRD27Q96NW4 1050 aa5.31□□□□□ -1.56
LSM3P4-201ENST00000502948 ZNF385AQ96PM9 386 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms