RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 PGPEP1LA6NFU8 196 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 AQP7P3A6NL99 342 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 GPR171O14626 319 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 TEX28O15482 410 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 EMC8O43402 210 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 MBTPS2O43462 519 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 LCMT2O60294 686 aaKnown RBP3.59□□□□□ -1.83
CLTC-209ENST00000498711 OR2A4O95047 310 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 DHFRP00374 187 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 IL5P05113 134 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 HOXD4P09016 255 aaPredicted RBP3.59□□□□□ -1.83
CLTC-209ENST00000498711 HNRNPA1P09651 372 aaKnown RBP eCLIP3.59□□□□□ -1.83
CLTC-209ENST00000498711 SMIM10L1P0DMW3 83 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 SAGP10523 405 aaPredicted RBP3.59□□□□□ -1.83
CLTC-209ENST00000498711 CD37P11049 281 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 F3P13726 295 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 CTRB1P17538 263 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 CSRP1P21291 193 aaKnown RBP3.59□□□□□ -1.83
CLTC-209ENST00000498711 F8A1P23610 371 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 ZP1P60852 638 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 ZNF85Q03923 595 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 IL18Q14116 193 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 NFE2L1Q14494 772 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 ARHGAP11BQ3KRB8 267 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 NHLRC3Q5JS37 347 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 OLFML2AQ68BL7 652 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 CTRB2Q6GPI1 263 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 ANKRD54Q6NXT1 300 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.59□□□□□ -1.83
CLTC-209ENST00000498711 TMPRSS11FQ6ZWK6 438 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 EIF4E3Q8N5X7 224 aaKnown RBP3.59□□□□□ -1.83
CLTC-209ENST00000498711 EID2Q8N6I1 236 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 SIRT6Q8N6T7 355 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 TTLQ8NG68 377 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 OR4F15Q8NGB8 312 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 OR51Q1Q8NH59 317 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 LHFPL5Q8TAF8 219 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 PIGXQ8TBF5 258 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 ZNF431Q8TF32 576 aaPredicted RBP3.59□□□□□ -1.83
CLTC-209ENST00000498711 SKA2Q8WVK7 121 aaPredicted RBP3.59□□□□□ -1.83
CLTC-209ENST00000498711 SLC9A6Q92581 669 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 PTP4A1Q93096 173 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 ARRDC3Q96B67 414 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 OTULINQ96BN8 352 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 SMIM10Q96HG1 83 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 MOGAT1Q96PD6 335 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 RBP7Q96R05 134 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 OR2A7Q96R45 310 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 OR7D2Q96RA2 312 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 C17orf62Q9BQA9 187 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 DPH7Q9BTV6 452 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 FAIM2Q9BWQ8 316 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 BEX2Q9BXY8 128 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 OR10A2Q9H208 303 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 SLC6A15Q9H2J7 730 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 KCNN2Q9H2S1 579 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 DPAGT1Q9H3H5 408 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 NARFLQ9H6Q4 476 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 ZNF552Q9H707 407 aaPredicted RBP3.59□□□□□ -1.83
CLTC-209ENST00000498711 LYARQ9NX58 379 aaKnown RBP3.59□□□□□ -1.83
CLTC-209ENST00000498711 TEX10Q9NXF1 929 aaPredicted RBP3.59□□□□□ -1.83
CLTC-209ENST00000498711 ANKRD10Q9NXR5 420 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 NLGN3Q9NZ94 848 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 PIPOXQ9P0Z9 390 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 DKK4Q9UBT3 224 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 SERTAD3Q9UJW9 196 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 PCYT1BQ9Y5K3 369 aaPredicted RBP3.59□□□□□ -1.83
CLTC-209ENST00000498711 KCNE3Q9Y6H6 103 aa3.59□□□□□ -1.83
CLTC-209ENST00000498711 PLSCR5A0PG75 271 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 NAP1L6A6NFF2 107 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 MFSD2BA6NFX1 497 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 EPOPA6NHQ4 379 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 KIAA1324LA8MWY0 1029 aaPredicted RBP3.59□□□□□ -1.84
CLTC-209ENST00000498711 GPR89AB7ZAQ6 455 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 C4orf51C9J302 202 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 NEDD8-MDP1E9PL57 170 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 SMLR1H3BR10 107 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 SULT1B1O43704 296 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 PRAF2O60831 178 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 FZD7O75084 574 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 SH3BGRLO75368 114 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 NCR1O76036 304 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 UCHL1P09936 223 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 GPR89BP0CG08 455 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 ALPPL2P10696 532 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 ANXA3P12429 323 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 CPN1P15169 458 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 GNSP15586 552 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 STOMP27105 288 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 SHC1P29353 583 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 UQCRC1P31930 480 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 GALNSP34059 522 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 AHRP35869 848 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 PLA2G5P39877 138 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 NNMTP40261 264 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 DGKEP52429 567 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 CASP6P55212 293 aa3.59□□□□□ -1.84
CLTC-209ENST00000498711 RPS11P62280 158 aaKnown RBP eCLIP3.59□□□□□ -1.84
CLTC-209ENST00000498711 SRSF3P84103 164 aaKnown RBP3.59□□□□□ -1.84
CLTC-209ENST00000498711 PITPNAQ00169 270 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms