RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 MED31Q9Y3C7 131 aa11.41□□□□□ -0.58
TMEM39B-209ENST00000498613 CORINQ9Y5Q5 1042 aa11.41□□□□□ -0.58
TMEM39B-209ENST00000498613 V9GYQ6 96 aa11.41□□□□□ -0.58
TMEM39B-209ENST00000498613 MED12Q93074 2177 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 A0A0G2JNJ9 132 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 LIPT2A6NK58 231 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 TMEM229AB2RXF0 380 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 CLDN14O95500 239 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 TGM6O95932 706 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 LDLRP01130 860 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 H1F0P07305 194 aaKnown RBP11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 YES1P07947 543 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 NQO1P15559 274 aaKnown RBP11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 SHC1P29353 583 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 IFNGR2P38484 337 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 YAP1P46937 504 aaKnown RBP11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 MS4A2Q01362 244 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 PDK3Q15120 406 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 ZNF239Q16600 458 aaKnown RBP11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 OTUD3Q5T2D3 398 aaPredicted RBP11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 C1orf146Q5VVC0 180 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 PAQR6Q6TCH4 344 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 LINC00114Q6XXX2 140 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 FAM214BQ7L5A3 538 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 YTHDF3Q7Z739 585 aaKnown RBP11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 ZDHHC21Q8IVQ6 265 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 C9orf106Q8NAJ2 232 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 OR4D11Q8NGI4 311 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 TMEM239Q8WW34 195 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 ZNF300Q96RE9 604 aaPredicted RBP11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 WFDC6Q9BQY6 131 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 SF3B5Q9BWJ5 86 aaKnown RBP11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 IL1RAPQ9NPH3 570 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 Q9UFV3 132 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 POMPQ9Y244 141 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 RASD1Q9Y272 281 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 B3GALT5Q9Y2C3 310 aa11.4□□□□□ -0.58
TMEM39B-209ENST00000498613 NOTCH2Q04721 2471 aa11.4□□□□□ -0.59
TMEM39B-209ENST00000498613 DIDO1Q9BTC0 2240 aaKnown RBP11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 WIPF3A6NGB9 483 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 hCG_2039718K7EN88 272 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 GNGT2O14610 69 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 CYTIPO60759 359 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 MT-ND1P03886 318 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 RAP2AP10114 183 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 BMP5P22003 454 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 RRM2P31350 389 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 IL1RL1Q01638 556 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 PMS2P3Q13401 168 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 C1DQ13901 141 aaKnown RBP11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 ZNF730Q6ZMV8 503 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 H1FNTQ75WM6 255 aaPredicted RBP11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 CCDC71Q8IV32 467 aaPredicted RBP11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 OFCC1Q8IZS5 231 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 LINC00471Q8N535 108 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 RNF128Q8TEB7 428 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 KTI12Q96EK9 354 aaPredicted RBP11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 RSRC1Q96IZ7 334 aaKnown RBP11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 NDEL1Q9GZM8 345 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 COQ10BQ9H8M1 238 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 NMNAT1Q9HAN9 279 aaPredicted RBP11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 CHST11Q9NPF2 352 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 NANSQ9NR45 359 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 FOXD3Q9UJU5 478 aaPredicted RBP11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 A4GNTQ9UNA3 340 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 PROCRQ9UNN8 238 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 AURKCQ9UQB9 309 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 NBPF19A0A087WUL8 3843 aa11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 SPTBN1Q01082 2364 aaKnown RBP11.39□□□□□ -0.59
TMEM39B-209ENST00000498613 ZC3H12DA2A288 527 aaKnown RBP11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 CLEC18AA5D8T8 446 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 ZNF724A8MTY0 619 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 ACOT8O14734 319 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 NPIPB7O75200 414 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 SMNDC1O75940 238 aaKnown RBP eCLIP11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 AQP8O94778 261 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 AKR7A3O95154 331 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 GADD45GO95257 159 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 IGF2P01344 180 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 IMPDH2P12268 514 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 ZNF43P17038 809 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 PEX19P40855 299 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 ARHGDIAP52565 204 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 ADORA2A-AS1P86434 159 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 FGD3Q5JSP0 725 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 CLEC18BQ6UXF7 455 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 SEM1Q6ZVN7 128 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 PIWIL3Q7Z3Z3 882 aaKnown RBP11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 GALNT5Q7Z7M9 940 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 GPAT4Q86UL3 456 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 ZNF100Q8IYN0 542 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 GCNT2Q8N0V5 402 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 RPRMLQ8N4K4 120 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 MARVELD2Q8N4S9 558 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 SCAIQ8N9R8 606 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 CLEC18CQ8NCF0 446 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 OR6K3Q8NGY3 331 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 ACOT11Q8WXI4 607 aaPredicted RBP11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 TAAR8Q969N4 342 aa11.38□□□□□ -0.59
TMEM39B-209ENST00000498613 SGTBQ96EQ0 304 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms