RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 ELOA3BQ3SY89 546 aa16.23■□□□□ 0.19
HOXD11-202ENST00000498438 C6orf89Q6UWU4 347 aa16.23■□□□□ 0.19
HOXD11-202ENST00000498438 NET1Q7Z628 596 aaPredicted RBP16.23■□□□□ 0.19
HOXD11-202ENST00000498438 GPAT4Q86UL3 456 aa16.23■□□□□ 0.19
HOXD11-202ENST00000498438 LSMEM1Q8N8F7 131 aa16.23■□□□□ 0.19
HOXD11-202ENST00000498438 BHLHE22Q8NFJ8 381 aaPredicted RBP16.23■□□□□ 0.19
HOXD11-202ENST00000498438 ELOA3Q8NG57 546 aa16.23■□□□□ 0.19
HOXD11-202ENST00000498438 OR9K2Q8NGE7 335 aa16.23■□□□□ 0.19
HOXD11-202ENST00000498438 OR52E4Q8NGH9 312 aa16.23■□□□□ 0.19
HOXD11-202ENST00000498438 SF3B5Q9BWJ5 86 aaKnown RBP16.23■□□□□ 0.19
HOXD11-202ENST00000498438 PRR14Q9BWN1 585 aa16.23■□□□□ 0.19
HOXD11-202ENST00000498438 CCDC134Q9H6E4 229 aa16.23■□□□□ 0.19
HOXD11-202ENST00000498438 KAT8Q9H7Z6 458 aaKnown RBP16.23■□□□□ 0.19
HOXD11-202ENST00000498438 NGBQ9NPG2 151 aa16.23■□□□□ 0.19
HOXD11-202ENST00000498438 ASB6Q9NWX5 421 aa16.23■□□□□ 0.19
HOXD11-202ENST00000498438 TESQ9UGI8 421 aaKnown RBP16.23■□□□□ 0.19
HOXD11-202ENST00000498438 SLC13A4Q9UKG4 626 aa16.23■□□□□ 0.19
HOXD11-202ENST00000498438 MFN2O95140 757 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 OPN1SWP03999 348 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 ADAM8P78325 824 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 FAPQ12884 760 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 PPA1Q15181 289 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 NCMAPQ5T1S8 102 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 SMYD1Q8NB12 490 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 PIGTQ969N2 578 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 TMEM45BQ96B21 275 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 KTI12Q96EK9 354 aaPredicted RBP16.22■□□□□ 0.19
HOXD11-202ENST00000498438 ZNF385AQ96PM9 386 aaKnown RBP16.22■□□□□ 0.19
HOXD11-202ENST00000498438 WFDC6Q9BQY6 131 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 PTDSS2Q9BVG9 487 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 TMUB1Q9BVT8 246 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 TRIM2Q9C040 744 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 C12orf10Q9HB07 376 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 MED4Q9NPJ6 270 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 SAR1AQ9NR31 198 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 MRGBPQ9NV56 204 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 PARPBPQ9NWS1 579 aa16.22■□□□□ 0.19
HOXD11-202ENST00000498438 CIB4A0PJX0 185 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 OR5H1A6NKK0 313 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 CCT8L1PA6NM43 557 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 FTCDNL1E5RQL4 147 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 HS3ST1O14792 307 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 RPS5P46782 204 aaKnown RBP16.21■□□□□ 0.19
HOXD11-202ENST00000498438 FOXG1P55316 489 aaPredicted RBP16.21■□□□□ 0.19
HOXD11-202ENST00000498438 FOXD4Q12950 439 aaPredicted RBP16.21■□□□□ 0.19
HOXD11-202ENST00000498438 KLF10Q13118 480 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 ALG10BQ5I7T1 473 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 TIMM23BQ5SRD1 257 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 ZIC4Q8N9L1 334 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 WFDC11Q8NEX6 87 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 OR10A6Q8NH74 314 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 MFSD8Q8NHS3 518 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 DNAJA4Q8WW22 397 aaPredicted RBP16.21■□□□□ 0.19
HOXD11-202ENST00000498438 SLC25A36Q96CQ1 311 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 MUCL1Q96DR8 90 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 PIP5K1AQ99755 562 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 ESRP2Q9H6T0 727 aaKnown RBP16.21■□□□□ 0.19
HOXD11-202ENST00000498438 SLC7A10Q9NS82 523 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 TAS2R16Q9NYV7 291 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 RNF115Q9Y4L5 304 aa16.21■□□□□ 0.19
HOXD11-202ENST00000498438 IGKV1D-42A0A075B6H8 117 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 PDLIM1O00151 329 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 CLOCKO15516 846 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 SMPD2O60906 423 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 CD3EP07766 207 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 ITGA5P08648 1049 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 PNMTP11086 282 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 CD99P14209 185 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 PCGF2P35227 344 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 BSPH1Q075Z2 132 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 CYLC2Q14093 348 aaPredicted RBP16.2■□□□□ 0.18
HOXD11-202ENST00000498438 TSPO2Q5TGU0 170 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 C9orf135Q5VTT2 229 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 FAM91A1Q658Y4 838 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 REP15Q6BDI9 236 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 TMEM225Q6GV28 225 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 ULK3Q6PHR2 472 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 RANBP3LQ86VV4 465 aaPredicted RBP16.2■□□□□ 0.18
HOXD11-202ENST00000498438 P2RY8Q86VZ1 359 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 KRTAP1-3Q8IUG1 177 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 SLC30A8Q8IWU4 369 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 AKAP1Q92667 903 aaKnown RBP eCLIP16.2■□□□□ 0.18
HOXD11-202ENST00000498438 PIF1Q9H611 641 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 NPAP1Q9NZP6 1156 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 UPB1Q9UBR1 384 aa16.2■□□□□ 0.18
HOXD11-202ENST00000498438 A0A0B4J2E0 115 aa16.19■□□□□ 0.18
HOXD11-202ENST00000498438 A0A1B0GX12 115 aa16.19■□□□□ 0.18
HOXD11-202ENST00000498438 BBIP1A8MTZ0 92 aa16.19■□□□□ 0.18
HOXD11-202ENST00000498438 M0QX08 132 aa16.19■□□□□ 0.18
HOXD11-202ENST00000498438 M0R3H8 397 aa16.19■□□□□ 0.18
HOXD11-202ENST00000498438 FXYD1O00168 92 aa16.19■□□□□ 0.18
HOXD11-202ENST00000498438 MRASO14807 208 aa16.19■□□□□ 0.18
HOXD11-202ENST00000498438 TPST2O60704 377 aa16.19■□□□□ 0.18
HOXD11-202ENST00000498438 VAMP5O95183 116 aa16.19■□□□□ 0.18
HOXD11-202ENST00000498438 GTF2E2P29084 291 aaKnown RBP16.19■□□□□ 0.18
HOXD11-202ENST00000498438 HOXC12P31275 282 aa16.19■□□□□ 0.18
HOXD11-202ENST00000498438 GZMMP51124 257 aa16.19■□□□□ 0.18
HOXD11-202ENST00000498438 NKX6-1P78426 367 aaPredicted RBP16.19■□□□□ 0.18
HOXD11-202ENST00000498438 MAPRE2Q15555 327 aa16.19■□□□□ 0.18
HOXD11-202ENST00000498438 OR1Q1Q15612 314 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms