RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 STAMBPO95630 424 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 MMP1P03956 469 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 KRT8P05787 483 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 HOXC4P09017 264 aaPredicted RBP2.17□□□□□ -2.06
PSPC1-205ENST00000497722 DBTP11182 482 aaKnown RBP2.17□□□□□ -2.06
PSPC1-205ENST00000497722 LAP3P28838 519 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 IL12AP29459 219 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 PPT1P50897 306 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 DAZ2Q13117 558 aaKnown RBP2.17□□□□□ -2.06
PSPC1-205ENST00000497722 EIF4EBP2Q13542 120 aaPredicted RBP2.17□□□□□ -2.06
PSPC1-205ENST00000497722 GGTLC2Q14390 218 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 C1orf100Q5SVJ3 147 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 AGBL2Q5U5Z8 902 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 OR52E8Q6IFG1 317 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 C11orf71Q6IPW1 123 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 PYHIN1Q6K0P9 492 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 SLC25A24Q6NUK1 477 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 PMF1Q6P1K2 205 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 GET4Q7L5D6 327 aaPredicted RBP2.17□□□□□ -2.06
PSPC1-205ENST00000497722 ZNF786Q8N393 782 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 FBXO30Q8TB52 745 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 BLOC1S5Q8TDH9 187 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 CHCHD10Q8WYQ3 142 aaPredicted RBP2.17□□□□□ -2.06
PSPC1-205ENST00000497722 ARPC1AQ92747 370 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 CMTM7Q96FZ5 175 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 CCNL2Q96S94 520 aaPredicted RBP2.17□□□□□ -2.06
PSPC1-205ENST00000497722 HDHD3Q9BSH5 251 aaPredicted RBP2.17□□□□□ -2.06
PSPC1-205ENST00000497722 CLMPQ9H6B4 373 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 SUDS3Q9H7L9 328 aaPredicted RBP2.17□□□□□ -2.06
PSPC1-205ENST00000497722 DAZ3Q9NR90 486 aaKnown RBP2.17□□□□□ -2.06
PSPC1-205ENST00000497722 UFSP2Q9NUQ7 469 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 SIGLEC8Q9NYZ4 499 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 DEC1Q9P2X7 70 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 KLK12Q9UKR0 248 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 RASD1Q9Y272 281 aa2.17□□□□□ -2.06
PSPC1-205ENST00000497722 TRIOBPQ9H2D6 2365 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 RPAP1Q9BWH6 1393 aaPredicted RBP2.16□□□□□ -2.06
PSPC1-205ENST00000497722 C15orf38-AP3S2A0A0A6YYH1 394 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 TCRBV9S1A1TA0A576 114 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 PSMB11A5LHX3 300 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 RBMY1BA6NDE4 496 aaKnown RBP2.16□□□□□ -2.06
PSPC1-205ENST00000497722 RBMY1EA6NEQ0 496 aaKnown RBP2.16□□□□□ -2.06
PSPC1-205ENST00000497722 FAM166BA8MTA8 275 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 BTN3A3O00478 584 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 TOM1O60784 492 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 ICOSLGO75144 302 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 MTX2O75431 263 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 RBMY1DP0C7P1 496 aaKnown RBP2.16□□□□□ -2.06
PSPC1-205ENST00000497722 RBMY1A1P0DJD3 496 aaKnown RBP2.16□□□□□ -2.06
PSPC1-205ENST00000497722 HNF1AP20823 631 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 MMP11P24347 488 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 OTX2P32243 289 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 RPS10P46783 165 aaKnown RBP2.16□□□□□ -2.06
PSPC1-205ENST00000497722 GSSP48637 474 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 HERVK_113P61574 105 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 MECOMQ03112 1051 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 OXA1LQ15070 435 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 BCL7AQ4VC05 210 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 KLF17Q5JT82 389 aaPredicted RBP2.16□□□□□ -2.06
PSPC1-205ENST00000497722 GPR157Q5UAW9 335 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 CES3Q6UWW8 571 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 IL34Q6ZMJ4 242 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 ZNF429Q86V71 674 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 PAQR7Q86WK9 346 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 PLA2G4DQ86XP0 818 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 RDH10Q8IZV5 341 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 OR10G3Q8NGC4 313 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 OR51G1Q8NGK1 321 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 OR6X1Q8NH79 312 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 NDRG1Q92597 394 aaKnown RBP2.16□□□□□ -2.06
PSPC1-205ENST00000497722 TIMD4Q96H15 378 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 SECISBP2Q96T21 854 aaKnown RBP2.16□□□□□ -2.06
PSPC1-205ENST00000497722 RNF2Q99496 336 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 MRPL45Q9BRJ2 306 aaKnown RBP2.16□□□□□ -2.06
PSPC1-205ENST00000497722 RIOK1Q9BRS2 568 aaKnown RBP2.16□□□□□ -2.06
PSPC1-205ENST00000497722 PELOQ9BRX2 385 aaKnown RBP2.16□□□□□ -2.06
PSPC1-205ENST00000497722 GBA3Q9H227 469 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 LRRN3Q9H3W5 708 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 NXF3Q9H4D5 531 aaKnown RBP2.16□□□□□ -2.06
PSPC1-205ENST00000497722 RAB18Q9NP72 206 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 MYOZ2Q9NPC6 264 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 POLE4Q9NR33 117 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 PIPOXQ9P0Z9 390 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 MEMO1Q9Y316 297 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 SLC25A15Q9Y619 301 aa2.16□□□□□ -2.06
PSPC1-205ENST00000497722 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
PSPC1-205ENST00000497722 CCDC182A6NF36 153 aa2.15□□□□□ -2.07
PSPC1-205ENST00000497722 E9PBE3 544 aa2.15□□□□□ -2.07
PSPC1-205ENST00000497722 LOC110117498-PIK3R3F6TDL0 507 aa2.15□□□□□ -2.07
PSPC1-205ENST00000497722 PANO1I0J062 215 aa2.15□□□□□ -2.07
PSPC1-205ENST00000497722 ARPC3O15145 178 aa2.15□□□□□ -2.07
PSPC1-205ENST00000497722 ZNF208O43345 1280 aa2.15□□□□□ -2.07
PSPC1-205ENST00000497722 ZNF44P15621 663 aa2.15□□□□□ -2.07
PSPC1-205ENST00000497722 ZNF32P17041 273 aa2.15□□□□□ -2.07
PSPC1-205ENST00000497722 CMA1P23946 247 aa2.15□□□□□ -2.07
PSPC1-205ENST00000497722 LONP1P36776 959 aaKnown RBP2.15□□□□□ -2.07
PSPC1-205ENST00000497722 CTRLP40313 264 aa2.15□□□□□ -2.07
PSPC1-205ENST00000497722 MAP3K8P41279 467 aa2.15□□□□□ -2.07
PSPC1-205ENST00000497722 KIR2DS4P43632 304 aa2.15□□□□□ -2.07
PSPC1-205ENST00000497722 SMARCB1Q12824 385 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms