RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 IFT52Q9Y366 437 aa2.06□□□□□ -2.08
CKS1BP2-201ENST00000497342 MRPL11Q9Y3B7 192 aaKnown RBP2.06□□□□□ -2.08
CKS1BP2-201ENST00000497342 MRPS18CQ9Y3D5 142 aaKnown RBP2.06□□□□□ -2.08
CKS1BP2-201ENST00000497342 INSL5Q9Y5Q6 135 aa2.06□□□□□ -2.08
CKS1BP2-201ENST00000497342 NPTNQ9Y639 398 aa2.06□□□□□ -2.08
CKS1BP2-201ENST00000497342 CCDC171Q6TFL3 1326 aa2.06□□□□□ -2.08
CKS1BP2-201ENST00000497342 CADP27708 2225 aa2.06□□□□□ -2.08
CKS1BP2-201ENST00000497342 MUC2Q02817 5179 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 HRNRQ86YZ3 2850 aaPredicted RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 A0A1W2PPV9 198 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 GABRR3A8MPY1 467 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 MKRN2OSH3BPM6 223 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 C19orf84I3L1E1 186 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 WRBO00258 174 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 FOXE1O00358 373 aaPredicted RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 SURF4O15260 269 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 MSH4O15457 936 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 CLDN9O95484 217 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 OAS1P00973 400 aaKnown RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 GP1BAP07359 652 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 PRSS2P07478 247 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 SP1P08047 785 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 ALPIP09923 528 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 OR8G3PP0DMU2 310 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 MBL2P11226 248 aaPredicted RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 RALBP11234 206 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 RPL35AP18077 110 aaKnown RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 XRCC1P18887 633 aaPredicted RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 PTBP1P26599 531 aaKnown RBP eCLIP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 CDC25AP30304 524 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 CEACAM8P31997 349 aaPredicted RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 GPR183P32249 361 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 CD80P33681 288 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 SPAM1P38567 509 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 SOX3P41225 446 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 HTR5AP47898 357 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 PCYT1AP49585 367 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 STK19P49842 368 aaPredicted RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 EMDP50402 254 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 HNRNPA3P51991 378 aaKnown RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 CDH11P55287 796 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 SH3BGRP55822 239 aaPredicted RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 CLDN18P56856 261 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 ACY1Q03154 408 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 FGL1Q08830 312 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 SLC17A1Q14916 467 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 SF3B4Q15427 424 aaKnown RBP eCLIP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 STK11Q15831 433 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 PSMD5Q16401 504 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 PPP1R3AQ16821 1122 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 GGTA1PQ4G0N0 100 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 MTX3Q5HYI7 312 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 XP32Q5T750 250 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 AGAP7PQ5VUJ5 663 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 OR4F3Q6IEY1 312 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 TMEM220Q6QAJ8 160 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 ZNF841Q6ZN19 808 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 C9orf47Q6ZRZ4 202 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 STOX1Q6ZVD7 989 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 KCTD8Q6ZWB6 473 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 MOB3BQ86TA1 216 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 TMEM17Q86X19 198 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 CARM1Q86X55 608 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 ZFAND4Q86XD8 727 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 KRTAP1-3Q8IUG1 177 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 PYROXD2Q8N2H3 581 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 CIARTQ8N365 385 aaPredicted RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 METTL27Q8N6F8 245 aaPredicted RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 PQLC3Q8N755 202 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 MFSD9Q8NBP5 474 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 OR2L3Q8NG85 312 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 OR2T11Q8NH01 316 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 KCNG3Q8TAE7 436 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 FNDC8Q8TC99 324 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 SLC22A8Q8TCC7 542 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 SCFD1Q8WVM8 642 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 ASB5Q8WWX0 329 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 LIPHQ8WWY8 451 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 ST8SIA1Q92185 356 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 ZMYND19Q96E35 227 aaPredicted RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 NSL1Q96IY1 281 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 AGAP4Q96P64 663 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 CITED1Q99966 193 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 C11orf70Q9BRQ4 267 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 ZNF670Q9BS34 389 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 RHNO1Q9BSD3 238 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 DUSP16Q9BY84 665 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 MRPL37Q9BZE1 423 aaKnown RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 RACGAP1Q9H0H5 632 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 GLT8D2Q9H1C3 349 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 NARFLQ9H6Q4 476 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 SMYD3Q9H7B4 428 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 TMEM185BQ9H7F4 350 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 EVA1AQ9H8M9 152 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 NMUR1Q9HB89 426 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 NRN1Q9NPD7 142 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 ZDHHC18Q9NUE0 388 aa2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 INTS9Q9NV88 658 aaKnown RBP2.05□□□□□ -2.08
CKS1BP2-201ENST00000497342 FAM120CQ9NX05 1096 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms