RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 ZNF414Q96IQ9 312 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 SLC38A2Q96QD8 506 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 SECISBP2Q96T21 854 aaKnown RBP3.19□□□□□ -1.9
VPS36-206ENST00000497149 RNF2Q99496 336 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 TMEM43Q9BTV4 400 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 CAPS2Q9BXY5 557 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 PARD6BQ9BYG5 372 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 RBKSQ9H477 322 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 NXF3Q9H4D5 531 aaKnown RBP3.19□□□□□ -1.9
VPS36-206ENST00000497149 NHEJ1Q9H9Q4 299 aaPredicted RBP3.19□□□□□ -1.9
VPS36-206ENST00000497149 MMP26Q9NRE1 261 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 TRAF3IP3Q9Y228 551 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 PLEKHH1Q9ULM0 1364 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 RLFQ13129 1914 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 LTBP1Q14766 1721 aa3.19□□□□□ -1.9
VPS36-206ENST00000497149 TRIM49D1C9J1S8 452 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 TRAF3IP2O43734 574 aaPredicted RBP3.18□□□□□ -1.9
VPS36-206ENST00000497149 RAMP3O60896 148 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 DIRAS1O95057 198 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 OPN1MWP04001 364 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 KLK3P07288 261 aaPredicted RBP3.18□□□□□ -1.9
VPS36-206ENST00000497149 OPN1MW2P0DN77 364 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 OPN1MW3P0DN78 364 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 DBTP11182 482 aaKnown RBP3.18□□□□□ -1.9
VPS36-206ENST00000497149 PRDX3P30048 256 aaKnown RBP3.18□□□□□ -1.9
VPS36-206ENST00000497149 QARSP47897 775 aaKnown RBP3.18□□□□□ -1.9
VPS36-206ENST00000497149 CCT3P49368 545 aaKnown RBP3.18□□□□□ -1.9
VPS36-206ENST00000497149 ZNF133P52736 654 aaPredicted RBP3.18□□□□□ -1.9
VPS36-206ENST00000497149 TNFRSF17Q02223 184 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 CHIT1Q13231 466 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 OXA1LQ15070 435 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 CARD16Q5EG05 197 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 DMRTC1Q5HYR2 192 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 SAMD4BQ5PRF9 694 aaKnown RBP3.18□□□□□ -1.9
VPS36-206ENST00000497149 OR52E8Q6IFG1 317 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 ZNF530Q6P9A1 599 aaPredicted RBP3.18□□□□□ -1.9
VPS36-206ENST00000497149 HSDL2Q6YN16 418 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 CCDC73Q6ZRK6 1079 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 RFLNAQ6ZTI6 216 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 TBC1D21Q8IYX1 336 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 RNF175Q8N4F7 328 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 OR52H1Q8NGJ2 320 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 OR5D13Q8NGL4 314 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 FAM151AQ8WW52 585 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 CFAP53Q96M91 514 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 OXGR1Q96P68 337 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 NPAS2Q99743 824 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 NRTNQ99748 197 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 P2RY13Q9BPV8 354 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 MRPL45Q9BRJ2 306 aaKnown RBP3.18□□□□□ -1.9
VPS36-206ENST00000497149 CHMP4BQ9H444 224 aaKnown RBP3.18□□□□□ -1.9
VPS36-206ENST00000497149 YY1AP1Q9H869 796 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 PLGRKTQ9HBL7 147 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 THUMPD1Q9NXG2 353 aaKnown RBP3.18□□□□□ -1.9
VPS36-206ENST00000497149 HOXC10Q9NYD6 342 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 MTRF1LQ9UGC7 380 aaKnown RBP3.18□□□□□ -1.9
VPS36-206ENST00000497149 CDH9Q9ULB4 789 aa3.18□□□□□ -1.9
VPS36-206ENST00000497149 PRRC2AP48634 2157 aaKnown RBP3.18□□□□□ -1.9
VPS36-206ENST00000497149 ATAD2BQ9ULI0 1458 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 TCRBV9S1A1TA0A576 114 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 E9PBE3 544 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 LOC110117498-PIK3R3F6TDL0 507 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 KRTAP4-16G5E9R7 235 aaPredicted RBP3.17□□□□□ -1.9
VPS36-206ENST00000497149 ZNF208O43345 1280 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 MED7O43513 233 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 FAM189A1O60320 539 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 NCK1P16333 377 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 ZNF17P17021 662 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 MDKP21741 143 aaPredicted RBP3.17□□□□□ -1.9
VPS36-206ENST00000497149 CCR1P32246 355 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 GLP1RP43220 463 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 SSR1P43307 286 aaKnown RBP3.17□□□□□ -1.9
VPS36-206ENST00000497149 DUSP3P51452 185 aaPredicted RBP3.17□□□□□ -1.9
VPS36-206ENST00000497149 GPM6AP51674 278 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 CRYBB1P53674 252 aaPredicted RBP3.17□□□□□ -1.9
VPS36-206ENST00000497149 DLX1P56177 255 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 TAS2R19P59542 299 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 NCBP1Q09161 790 aaKnown RBP3.17□□□□□ -1.9
VPS36-206ENST00000497149 IL24Q13007 206 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 DUSP7Q16829 419 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 MICBQ29980 383 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 PDZK1Q5T2W1 519 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 PMF1Q6P1K2 205 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 IGFL2Q6UWQ7 119 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 PGAP1Q75T13 922 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 SLC26A11Q86WA9 606 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 SCFD1Q8WVM8 642 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 UFD1Q92890 307 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 CMTM7Q96FZ5 175 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 SLC41A3Q96GZ6 507 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 RPRD1AQ96P16 312 aaPredicted RBP3.17□□□□□ -1.9
VPS36-206ENST00000497149 PSKH2Q96QS6 385 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 KCNA7Q96RP8 456 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 CLCC1Q96S66 551 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 MBOAT4Q96T53 435 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 CCT7Q99832 543 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 NRIP2Q9BQI9 281 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 POLE4Q9NR33 117 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 CLEC4AQ9UMR7 237 aa3.17□□□□□ -1.9
VPS36-206ENST00000497149 NEU3Q9UQ49 428 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms