RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 FLRT2O43155 660 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 ZMPSTE24O75844 475 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 SULT1C4O75897 302 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 UROSP10746 265 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 HLA-DPA1P20036 260 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 S100A1P23297 94 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 IL12AP29459 219 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 CCR1P32246 355 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 RPL9P32969 192 aaKnown RBP3.15□□□□□ -1.91
TRIM4-205ENST00000496896 SLC1A2P43004 574 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 SERPINH1P50454 418 aaKnown RBP3.15□□□□□ -1.91
TRIM4-205ENST00000496896 SLC7A2P52569 658 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 RAD23AP54725 363 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 PKNOX1P55347 436 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 KCNK10P57789 538 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 OSTNP61366 133 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 PPIAP62937 165 aaKnown RBP3.15□□□□□ -1.91
TRIM4-205ENST00000496896 CRADDP78560 199 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 ADARB1P78563 741 aaKnown RBP3.15□□□□□ -1.91
TRIM4-205ENST00000496896 PLOD1Q02809 727 aaPredicted RBP3.15□□□□□ -1.91
TRIM4-205ENST00000496896 RELAQ04206 551 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 ARHGAP1Q07960 439 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 LCP2Q13094 533 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 GK3PQ14409 553 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 C16orf72Q14CZ0 275 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 NRF1Q16656 503 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 POM121L1PQ3SYA9 428 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 ZRANB3Q5FWF4 1079 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 PPM1LQ5SGD2 360 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 ZNF678Q5SXM1 525 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 ZNF470Q6ECI4 717 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 BTNL8Q6UX41 500 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 CLEC20AQ6ZU45 233 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 NCCRP1Q6ZVX7 275 aaPredicted RBP3.15□□□□□ -1.91
TRIM4-205ENST00000496896 CCDC80Q76M96 950 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 CATSPER4Q7RTX7 472 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 PRSS48Q7RTY5 328 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 ADCK2Q7Z695 626 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 FAM219AQ8IW50 185 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 TIGD4Q8IY51 512 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 APCDD1Q8J025 514 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 C8orf59Q8N0T1 100 aaPredicted RBP3.15□□□□□ -1.91
TRIM4-205ENST00000496896 ELMOD1Q8N336 334 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 CBR4Q8N4T8 237 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 CCNYL1Q8N7R7 359 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 ZNF555Q8NEP9 628 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 OR8J3Q8NGG0 315 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 RHOXF1Q8NHV9 184 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 STAG3L4Q8TBR4 150 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 SLC2A14Q8TDB8 520 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 HEXDCQ8WVB3 486 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 KCTD4Q8WVF5 259 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 CANT1Q8WVQ1 401 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 FCGR1BQ92637 280 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 SLCO4A1Q96BD0 722 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 LRRC58Q96CX6 371 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 SMARCD1Q96GM5 515 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 ELMO2Q96JJ3 720 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 BTN2A3PQ96KV6 586 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 ZNF641Q96N77 438 aaPredicted RBP3.15□□□□□ -1.91
TRIM4-205ENST00000496896 TRIB3Q96RU7 358 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 NPAS2Q99743 824 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 CIB1Q99828 191 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 OMDQ99983 421 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 KCTD14Q9BQ13 255 aaPredicted RBP3.15□□□□□ -1.91
TRIM4-205ENST00000496896 FEM1AQ9BSK4 669 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 MLPHQ9BV36 600 aaPredicted RBP3.15□□□□□ -1.91
TRIM4-205ENST00000496896 PINK1Q9BXM7 581 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 MROQ9BYG7 248 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 SHCBP1LQ9BZQ2 653 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 DERL2Q9GZP9 239 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 NACA2Q9H009 215 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 ING2Q9H160 280 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 EHD1Q9H4M9 534 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 RPF2Q9H7B2 306 aaKnown RBP3.15□□□□□ -1.91
TRIM4-205ENST00000496896 SYNDIG1Q9H7V2 258 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 MINDY3Q9H8M7 445 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 GORASP2Q9H8Y8 452 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 SP140LQ9H930 580 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 CSNK1G1Q9HCP0 422 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 FBXO8Q9NRD0 319 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 CHRAC1Q9NRG0 131 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 ABCC13Q9NSE7 274 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 PIGVQ9NUD9 493 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 FAM49BQ9NUQ9 324 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 SMOXQ9NWM0 555 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 COMMD8Q9NX08 183 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 DDIT4Q9NX09 232 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 RHBDL2Q9NX52 303 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 THYN1Q9P016 225 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 CCDC167Q9P0B6 97 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 OR12D3Q9UGF7 316 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 C3orf18Q9UK00 162 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 CDH9Q9ULB4 789 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 NAALAD2Q9Y3Q0 740 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 ORC6Q9Y5N6 252 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 SNX5Q9Y5X3 404 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 SBF1O95248 1867 aa3.15□□□□□ -1.91
TRIM4-205ENST00000496896 BRCA1P38398 1863 aaKnown RBP3.15□□□□□ -1.91
TRIM4-205ENST00000496896 PATJQ8NI35 1801 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms