RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 RAD51DO75771 328 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 AHSA1O95433 338 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 PLAUP00749 431 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 IGHV3-9P01782 118 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 PTH2RP49190 550 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 CEACAM7Q14002 265 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 SCARB2Q14108 478 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 C1orf140Q5VVS0 124 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 C5orf46Q6UWT4 87 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 DHDDSQ86SQ9 333 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 BIVMQ86UB2 503 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 C17orf78Q8N4C9 275 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 DPP10Q8N608 796 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 TSPEARQ8WU66 669 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 C18orf12Q96KH6 178 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 IKZF5Q9H5V7 419 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 NPHS2Q9NP85 383 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 MRGBPQ9NV56 204 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 ZNF701Q9NV72 531 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-213ENST00000496347 ADPRHL2Q9NX46 363 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 TESQ9UGI8 421 aaKnown RBP13.86□□□□□ -0.19
HDAC4-213ENST00000496347 DCTN4Q9UJW0 460 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 ANGPT4Q9Y264 503 aa13.86□□□□□ -0.19
HDAC4-213ENST00000496347 CIB4A0PJX0 185 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 SASH3O75995 380 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 AKR7A3O95154 331 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 VAMP5O95183 116 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 ITGA5P08648 1049 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 SLC6A2P23975 617 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 NTF4P34130 210 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 NCALDP61601 193 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 RPS4XP62701 263 aaKnown RBP13.85□□□□□ -0.19
HDAC4-213ENST00000496347 TGFBR3Q03167 851 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 ZNF672Q499Z4 452 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-213ENST00000496347 DLEU7Q6UYE1 221 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 YTHDF3Q7Z739 585 aaKnown RBP13.85□□□□□ -0.19
HDAC4-213ENST00000496347 C10orf111Q8N326 155 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 LSMEM1Q8N8F7 131 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 POMGNT2Q8NAT1 580 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 HIPK4Q8NE63 616 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 KBTBD8Q8NFY9 601 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 DNAJA4Q8WW22 397 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-213ENST00000496347 RADILQ96JH8 1075 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 ZNF607Q96SK3 696 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 EVA1AQ9H8M9 152 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 RPS6KB2Q9UBS0 482 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 CSPG4Q6UVK1 2322 aa13.85□□□□□ -0.19
HDAC4-213ENST00000496347 A0A0G2JND7 137 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 ELOA3DA6NLF2 546 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-213ENST00000496347 CCT8L1PA6NM43 557 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 FAM171A2A8MVW0 826 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 SERPINB7O75635 380 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 PNMTP11086 282 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 GTF2E2P29084 291 aaKnown RBP13.84□□□□□ -0.19
HDAC4-213ENST00000496347 P2RY4P51582 365 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 FAPQ12884 760 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 BNIP2Q12982 314 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 ADRM1Q16186 407 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 ELOA3BQ3SY89 546 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 METTL21CQ5VZV1 264 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 KLHL17Q6TDP4 642 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 TMEM108Q6UXF1 575 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 ABHD12BQ7Z5M8 362 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-213ENST00000496347 GPAT4Q86UL3 456 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 TMEM99Q8N816 258 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 C11orf65Q8NCR3 313 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 ELOA3Q8NG57 546 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 MFSD8Q8NHS3 518 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 COX4I2Q96KJ9 171 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 TRIM2Q9C040 744 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 SLCO5A1Q9H2Y9 848 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 FAIMQ9NVQ4 179 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 NPAP1Q9NZP6 1156 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 UPB1Q9UBR1 384 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 SLC13A4Q9UKG4 626 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 RASD1Q9Y272 281 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 NDUFAF1Q9Y375 327 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 SLC25A15Q9Y619 301 aa13.84□□□□□ -0.19
HDAC4-213ENST00000496347 DPRXA6NFQ7 191 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 OR6C65A6NJZ3 312 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 FTCDNL1E5RQL4 147 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 INHBBP09529 407 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 PTAFRP25105 342 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 HTR2AP28223 471 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 MPGP29372 298 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 CDH11P55287 796 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 HOXC5Q00444 222 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 RBBP4Q09028 425 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 ETFDHQ16134 617 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 CYP51A1Q16850 503 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 ALG10BQ5I7T1 473 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 SWT1Q5T5J6 900 aaKnown RBP13.83□□□□□ -0.2
HDAC4-213ENST00000496347 FAM91A1Q658Y4 838 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 AAED1Q7RTV5 226 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 COMTD1Q86VU5 262 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 ARMC8Q8IUR7 673 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 SLC30A8Q8IWU4 369 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 OR52E4Q8NGH9 312 aa13.83□□□□□ -0.2
HDAC4-213ENST00000496347 LILRB1Q8NHL6 650 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-213ENST00000496347 THOC1Q96FV9 657 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms