RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 GDI2P50395 445 aaKnown RBP10.12□□□□□ -0.79
CMSS1-208ENST00000496116 HCCSP53701 268 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 DCAF7P61962 342 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 ERVK-25P63136 954 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 KCNAB1Q14722 419 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 CD226Q15762 336 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 ZNF74Q16587 644 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 SAMD12Q8N8I0 201 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 DUSP18Q8NEJ0 188 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 ZNF563Q8TA94 476 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 PELI1Q96FA3 418 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 HSPA12BQ96MM6 686 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 TTTY10Q9BZA0 68 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 NXF5Q9H1B4 397 aaKnown RBP10.12□□□□□ -0.79
CMSS1-208ENST00000496116 GNG8Q9UK08 70 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 HIF3AQ9Y2N7 669 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 IGKV1D-42A0A075B6H8 117 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 TRBV2A0A0J9YWF9 115 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 OR6C68A6NDL8 312 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 A8MUA0 341 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 DUX1O43812 170 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 GLCEO94923 617 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 APEHP13798 732 aaKnown RBP10.12□□□□□ -0.79
CMSS1-208ENST00000496116 NPR2P20594 1047 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 THBS2P35442 1172 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 NR4A2P43354 598 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 SLC6A8P48029 635 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 PITPNBP48739 271 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 NKX2-5P52952 324 aaPredicted RBP10.12□□□□□ -0.79
CMSS1-208ENST00000496116 OR10A3P58181 314 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 ELAVL1Q15717 326 aaKnown RBP10.12□□□□□ -0.79
CMSS1-208ENST00000496116 TBRG1Q3YBR2 411 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 ZFP69Q49AA0 526 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 ALG10Q5BKT4 473 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 ZNF57Q68EA5 555 aaPredicted RBP10.12□□□□□ -0.79
CMSS1-208ENST00000496116 LEG1Q6P5S2 330 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 PLXDC1Q8IUK5 500 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 GPR135Q8IZ08 494 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 RFLNBQ8N5W9 214 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 TRMT10AQ8TBZ6 339 aaKnown RBP10.12□□□□□ -0.79
CMSS1-208ENST00000496116 RASD2Q96D21 266 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 DDOQ99489 341 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 NMNAT2Q9BZQ4 307 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 OR2B2Q9GZK3 357 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.12□□□□□ -0.79
CMSS1-208ENST00000496116 HDHD2Q9H0R4 259 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 C12orf10Q9HB07 376 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 TEKT2Q9UIF3 430 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 RNF215Q9Y6U7 377 aa10.12□□□□□ -0.79
CMSS1-208ENST00000496116 EYSQ5T1H1 3165 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 IGKV3D-11A0A0A0MRZ8 115 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 A0A0G2JMP0 313 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 TEX13CA0A0J9YWL9 993 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 A0A0X1KG70 313 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 CENPXA8MT69 81 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 NUDT21O43809 227 aaKnown RBP10.11□□□□□ -0.79
CMSS1-208ENST00000496116 PIAS2O75928 621 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 CD14P08571 375 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 EDNRAP25101 427 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 IL12BP29460 328 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 GXYLT1Q4G148 440 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 HLA-DQA1Q5Y7H0 255 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 CBLN3Q6UW01 205 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 NUP54Q7Z3B4 507 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 ZNF321PQ8N8H1 164 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 OR4M2Q8NGB6 313 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 UBASH3BQ8TF42 649 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 CAPSLQ8WWF8 208 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 PHYHIPQ92561 330 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 DAZLQ92904 295 aaKnown RBP10.11□□□□□ -0.79
CMSS1-208ENST00000496116 TSLPQ969D9 159 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 RFT1Q96AA3 541 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 ST6GAL2Q96JF0 529 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 GAL3ST4Q96RP7 486 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 UBE2ZQ9H832 354 aaPredicted RBP10.11□□□□□ -0.79
CMSS1-208ENST00000496116 MMP25Q9NPA2 562 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 ABRACLQ9P1F3 81 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 NCDNQ9UBB6 729 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 MOKQ9UQ07 419 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 N6AMT1Q9Y5N5 214 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 PCDH15Q96QU1 1955 aa10.11□□□□□ -0.79
CMSS1-208ENST00000496116 IGHV1OR21-1A0A087WYE8 117 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 A0A0G2JK05 382 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 NOTOA8MTQ0 251 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 A8MU76 341 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 H3BMH7 237 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 IMPA2O14732 288 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 FLRT2O43155 660 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 HYAL3O43820 417 aaPredicted RBP10.1□□□□□ -0.79
CMSS1-208ENST00000496116 PRKNO60260 465 aaPredicted RBP10.1□□□□□ -0.79
CMSS1-208ENST00000496116 GPRIN2O60269 458 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 SELENOFO60613 162 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 SERPINI2O75830 405 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 IGKV3-11P04433 115 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 EIF4EP06730 217 aaKnown RBP10.1□□□□□ -0.79
CMSS1-208ENST00000496116 HLA-DMAP28067 261 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 SDHAP31040 664 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 AQP2P41181 271 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 OR1D5P58170 312 aa10.1□□□□□ -0.79
CMSS1-208ENST00000496116 HACD4Q5VWC8 232 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms