RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 C16orf58Q96GQ5 468 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 TSNARE1Q96NA8 513 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 ZNF583Q96ND8 569 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 PANX2Q96RD6 677 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 CYTH2Q99418 400 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 DDOQ99489 341 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 FAM110AQ9BQ89 295 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 LLPHQ9BRT6 129 aaKnown RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 RBM4Q9BWF3 364 aaKnown RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 MRPL13Q9BYD1 178 aaKnown RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 SIRPDQ9H106 197 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 PPIL3Q9H2H8 161 aaKnown RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 SAP30LQ9HAJ7 183 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 TREM1Q9NP99 234 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 GPR173Q9NS66 373 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 ACSS1Q9NUB1 689 aaPredicted RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 ABHD10Q9NUJ1 306 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 MRPL22Q9NWU5 206 aaKnown RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 WWOXQ9NZC7 414 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 IL20RAQ9UHF4 553 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 STAP1Q9ULZ2 295 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 GRIP1Q9Y3R0 1128 aa4.09□□□□□ -1.75
XPA-204ENST00000496104 DYNC1H1Q14204 4646 aaKnown RBP4.09□□□□□ -1.75
XPA-204ENST00000496104 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 C1orf232A0A0U1RR37 186 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 A0A1W2PQ67 120 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 C1orf226A1L170 272 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 OR2AG2A6NM03 316 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 CASKO14936 926 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 PSMD3O43242 534 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 TNFSF13O75888 250 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 LYNP07948 512 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 SFTPBP07988 381 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 CHRM5P08912 532 aaPredicted RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 RFPL3SP0C7P2 107 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 MYZAPP0CAP1 466 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 PABPC4LP0CB38 370 aaKnown RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 STAG3L2P0CL84 134 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 PNMTP11086 282 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 GABRA1P14867 456 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 PTNP21246 168 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 PAICSP22234 425 aaKnown RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 CXCR2P25025 360 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 PRDX6P30041 224 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 RRM2P31350 389 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 ADRA1AP35348 466 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 SLC26A3P40879 764 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 GRIA1P42261 906 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 CDX1P47902 265 aaPredicted RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 SLC9A3P48764 834 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 FNTAP49354 379 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 RGS4P49798 205 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 PPT1P50897 306 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 IRX1P78414 480 aaPredicted RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 OCA2Q04671 838 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 LIPEQ05469 1076 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 CRYZQ08257 329 aaKnown RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 SIX1Q15475 284 aaPredicted RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 VMACQ2NL98 169 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 PRTGQ2VWP7 1150 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 AGAP6Q5VW22 663 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 NSUN5P2Q63ZY6 315 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 PTRHD1Q6GMV3 140 aaKnown RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 EIF3MQ7L2H7 374 aaKnown RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 C16orf62Q7Z3J2 963 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 ANKRD37Q7Z713 158 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 KIAA1328Q86T90 577 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 RPS19BP1Q86WX3 136 aaKnown RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 KLBQ86Z14 1044 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 LACC1Q8IV20 430 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 OFCC1Q8IZS5 231 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 ARHGAP24Q8N264 748 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 FAM109AQ8N4B1 249 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 TRAM1L1Q8N609 369 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 HORMAD2Q8N7B1 307 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 LKAAEAR1Q8TD35 194 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 LIPHQ8WWY8 451 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 ANKRD7Q92527 254 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 EMG1Q92979 244 aaKnown RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.08□□□□□ -1.76
XPA-204ENST00000496104 SLC35C1Q96A29 364 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 NTAN1Q96AB6 310 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 MARS2Q96GW9 593 aaKnown RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 WDYHV1Q96HA8 205 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 PRRC1Q96M27 445 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 RHNO1Q9BSD3 238 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 PCGF1Q9BSM1 259 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 ALKBH7Q9BT30 221 aaPredicted RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 TMEM43Q9BTV4 400 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 TRAF4Q9BUZ4 470 aaPredicted RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 TDRD1Q9BXT4 1180 aaKnown RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 HDHD2Q9H0R4 259 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 OR52A5Q9H2C5 316 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 METTL17Q9H7H0 456 aaPredicted RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 SDHAF3Q9NRP4 125 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.08□□□□□ -1.76
XPA-204ENST00000496104 NDUFA13Q9P0J0 144 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 MBD2Q9UBB5 411 aa4.08□□□□□ -1.76
XPA-204ENST00000496104 ZNF223Q9UK11 482 aaPredicted RBP4.08□□□□□ -1.76
XPA-204ENST00000496104 SH3GLB1Q9Y371 365 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms