RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 XP32Q5T750 250 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 LIPKQ5VXJ0 399 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 GPR139Q6DWJ6 353 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 SLC23A3Q6PIS1 610 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 LINC00114Q6XXX2 140 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 WDR88Q6ZMY6 472 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 MAMDC2Q7Z304 686 aaPredicted RBP6.33□□□□□ -1.4
USP39-219ENST00000496047 FAM220AQ7Z4H9 259 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 BCDIN3DQ7Z5W3 292 aaKnown RBP6.33□□□□□ -1.4
USP39-219ENST00000496047 PHC2Q8IXK0 858 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 GATSQ8NAP1 163 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 SLC37A3Q8NCC5 494 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 GALNT6Q8NCL4 622 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 AGBL5Q8NDL9 886 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 ATP6V1C2Q8NEY4 427 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 OR10H4Q8NGA5 316 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 OR8K3Q8NH51 312 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 MOSPD2Q8NHP6 518 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 NUBPLQ8TB37 319 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 NANOS1Q8WY41 292 aaKnown RBP6.33□□□□□ -1.4
USP39-219ENST00000496047 ABTB1Q969K4 478 aaPredicted RBP6.33□□□□□ -1.4
USP39-219ENST00000496047 ADIPOR1Q96A54 375 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 C3orf49Q96BT1 292 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 C1GALT1C1Q96EU7 318 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 COX4I2Q96KJ9 171 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 GPX7Q96SL4 187 aaPredicted RBP6.33□□□□□ -1.4
USP39-219ENST00000496047 ADOQ96SZ5 270 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 CNN2Q99439 309 aaKnown RBP6.33□□□□□ -1.4
USP39-219ENST00000496047 CRB3Q9BUF7 120 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 CCDC32Q9BV29 185 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 ALG8Q9BVK2 526 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 NUDT9Q9BW91 350 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 GTPBP2Q9BX10 602 aaKnown RBP6.33□□□□□ -1.4
USP39-219ENST00000496047 SLIRPQ9GZT3 109 aaKnown RBP6.33□□□□□ -1.4
USP39-219ENST00000496047 OR51V1Q9H2C8 321 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 SMURF1Q9HCE7 757 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 AKIP1Q9NQ31 210 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 MEPEQ9NQ76 525 aaPredicted RBP6.33□□□□□ -1.4
USP39-219ENST00000496047 C20orf141Q9NUB4 165 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 ASB6Q9NWX5 421 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 ERVK13-1Q9NX77 482 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 HAO2Q9NYQ3 351 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 TAS2R10Q9NYW0 307 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 TEKT2Q9UIF3 430 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 ZNF229Q9UJW7 825 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 MOKQ9UQ07 419 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 CLDN16Q9Y5I7 305 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 KCNMB2Q9Y691 235 aa6.33□□□□□ -1.4
USP39-219ENST00000496047 KMT2EQ8IZD2 1858 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 TRAV36DV7A0A075B6V5 113 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 TRDV1A0A1B0GX56 115 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 IDSB3KWA1 339 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 D6RAR5 112 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 J3QRK9 145 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 SOCS6O14544 535 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 XKRYO14609 159 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 GNB5O14775 395 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 CASKO14936 926 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 ARPC3O15145 178 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 SCO2O43819 266 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 OR2T1O43869 369 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 TSPAN2O60636 221 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 ZFAND5O76080 213 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 OR6A2O95222 327 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 AHSA1O95433 338 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 IGHEP01854 428 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 GP1BAP07359 652 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 OR2T7P0C7T2 308 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 FGF5P12034 268 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 NAGAP17050 411 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 ABCD3P28288 659 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 FGF9P31371 208 aaPredicted RBP6.32□□□□□ -1.4
USP39-219ENST00000496047 SDC2P34741 201 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 EVI2BP34910 448 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 GBX2P52951 348 aaPredicted RBP6.32□□□□□ -1.4
USP39-219ENST00000496047 BLVRAP53004 296 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 RPS3AP61247 264 aaKnown RBP6.32□□□□□ -1.4
USP39-219ENST00000496047 PPP3R1P63098 170 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 RNF4P78317 190 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 CFHR1Q03591 330 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 C17orf67Q0P5P2 114 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 SPEM2Q0P670 501 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 ATP1A4Q13733 1029 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 CRMP1Q14194 572 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 ALG10Q5BKT4 473 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 SLC35F1Q5T1Q4 408 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 DDI2Q5TDH0 399 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 FNDC7Q5VTL7 733 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 FAAH2Q6GMR7 532 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 ZNF544Q6NX49 715 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 PAPD4Q6PIY7 484 aaKnown RBP6.32□□□□□ -1.4
USP39-219ENST00000496047 C19orf48Q6RUI8 117 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 ZNF322Q6U7Q0 402 aaPredicted RBP6.32□□□□□ -1.4
USP39-219ENST00000496047 SHFQ7M4L6 423 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 OVCH1Q7RTY7 1134 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 KANSL1Q7Z3B3 1105 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 ANKRD37Q7Z713 158 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 ATG4DQ86TL0 474 aaPredicted RBP6.32□□□□□ -1.4
USP39-219ENST00000496047 LHFPL3Q86UP9 236 aa6.32□□□□□ -1.4
USP39-219ENST00000496047 ZBTB46Q86UZ6 589 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms