RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 TSPO2Q5TGU0 170 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 C1orf140Q5VVS0 124 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 AAED1Q7RTV5 226 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 SERPINA11Q86U17 422 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 PIAS4Q8N2W9 510 aaPredicted RBP11.21□□□□□ -0.61
PTPRF-214ENST00000496043 ZIC4Q8N9L1 334 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 MAL2Q969L2 176 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 TMEM45BQ96B21 275 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 SPDL1Q96EA4 605 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 EBF4Q9BQW3 602 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 GRIP2Q9C0E4 1043 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 SLC7A10Q9NS82 523 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 NPAP1Q9NZP6 1156 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 CCDC167Q9P0B6 97 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 RPS6KB2Q9UBS0 482 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 CHST2Q9Y4C5 530 aa11.21□□□□□ -0.61
PTPRF-214ENST00000496043 MAGED1Q9Y5V3 778 aaPredicted RBP11.21□□□□□ -0.61
PTPRF-214ENST00000496043 USF3Q68DE3 2245 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 A0A1W2PR80 420 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 PDLIM1O00151 329 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 KRT33AO76009 404 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 CD8AP01732 235 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 ITGA5P08648 1049 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 ETS2P15036 469 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 HOXB9P17482 250 aaPredicted RBP11.2□□□□□ -0.62
PTPRF-214ENST00000496043 CD40P25942 277 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 MPGP29372 298 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 CDH11P55287 796 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 TNK1Q13470 666 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 CLEC12BQ2HXU8 276 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 AGKQ53H12 422 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 TTMPQ5BVD1 217 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 PAGE3Q5JUK9 113 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 C9orf135Q5VTT2 229 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 AGAP6Q5VW22 663 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 SLC22A25Q6T423 547 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 ABHD12BQ7Z5M8 362 aaPredicted RBP11.2□□□□□ -0.62
PTPRF-214ENST00000496043 GPAT4Q86UL3 456 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 C17orf78Q8N4C9 275 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 WDR31Q8NA23 367 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 POMGNT2Q8NAT1 580 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 C1orf162Q8NEQ5 155 aaPredicted RBP11.2□□□□□ -0.62
PTPRF-214ENST00000496043 OR9K2Q8NGE7 335 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 MFSD8Q8NHS3 518 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 C3orf49Q96BT1 292 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 TRAF4Q9BUZ4 470 aaPredicted RBP11.2□□□□□ -0.62
PTPRF-214ENST00000496043 SPATA5L1Q9BVQ7 753 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 C1QTNF6Q9BXI9 259 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 AMBRA1Q9C0C7 1298 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 SLC52A3Q9NQ40 469 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 SLC17A5Q9NRA2 495 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 INTS9Q9NV88 658 aaKnown RBP11.2□□□□□ -0.62
PTPRF-214ENST00000496043 ADPRHL2Q9NX46 363 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 SLC25A37Q9NYZ2 338 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 SLAMF8Q9P0V8 285 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 POU2F3Q9UKI9 436 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 RASD1Q9Y272 281 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 AMDHD2Q9Y303 409 aa11.2□□□□□ -0.62
PTPRF-214ENST00000496043 EVPLLA8MZ36 301 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 M0R1B8 84 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 NR5A2O00482 541 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 NPIPB7O75200 414 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 AHSA1O95433 338 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 WNT11O96014 354 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 ARAFP10398 606 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 PRKAR1BP31321 381 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 CDKN1AP38936 164 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 ATP4BP51164 291 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 PRPS1P60891 318 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 HOXC5Q00444 222 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 CDK6Q00534 326 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 GCNT6Q5T4J0 391 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 REEP3Q6NUK4 255 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 CREB3L2Q70SY1 520 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 HDXQ7Z353 690 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 DTX2Q86UW9 622 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 KRT73Q86Y46 540 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 MSRB3Q8IXL7 192 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 NFKBIDQ8NI38 313 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 SLC25A36Q96CQ1 311 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 ZNF385AQ96PM9 386 aaKnown RBP11.19□□□□□ -0.62
PTPRF-214ENST00000496043 DHRS9Q9BPW9 319 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 SLCO5A1Q9H2Y9 848 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 RABEP2Q9H5N1 569 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 CORO2BQ9UQ03 480 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 GMEB1Q9Y692 573 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 NF1P21359 2839 aa11.19□□□□□ -0.62
PTPRF-214ENST00000496043 OR6C65A6NJZ3 312 aa11.18□□□□□ -0.62
PTPRF-214ENST00000496043 ELOA3DA6NLF2 546 aaPredicted RBP11.18□□□□□ -0.62
PTPRF-214ENST00000496043 HMGB1P1B2RPK0 211 aaPredicted RBP11.18□□□□□ -0.62
PTPRF-214ENST00000496043 TMEM229AB2RXF0 380 aa11.18□□□□□ -0.62
PTPRF-214ENST00000496043 E7EQL1 145 aa11.18□□□□□ -0.62
PTPRF-214ENST00000496043 FRS3O43559 492 aa11.18□□□□□ -0.62
PTPRF-214ENST00000496043 OR2T1O43869 369 aa11.18□□□□□ -0.62
PTPRF-214ENST00000496043 GPX2P18283 190 aa11.18□□□□□ -0.62
PTPRF-214ENST00000496043 SLC6A2P23975 617 aa11.18□□□□□ -0.62
PTPRF-214ENST00000496043 TTKP33981 857 aa11.18□□□□□ -0.62
PTPRF-214ENST00000496043 FABP6P51161 128 aa11.18□□□□□ -0.62
PTPRF-214ENST00000496043 P2RY4P51582 365 aa11.18□□□□□ -0.62
PTPRF-214ENST00000496043 VEZF1Q14119 521 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms