RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	VLDLR	P98155	873 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	LTB	Q06643	244 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	SGCB	Q16585	318 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	ZNF239	Q16600	458 aa	Known RBP	10.62	□□□□□ -0.71
APTX-233	ENST00000496030	ELOA3B	Q3SY89	546 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	C1orf140	Q5VVS0	124 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	MTFR2	Q6P444	385 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	FKBP9P1	Q75LS8	142 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	DHFR2	Q86XF0	187 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	NKAIN4	Q8IVV8	208 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.62	□□□□□ -0.71
APTX-233	ENST00000496030	ELOA3	Q8NG57	546 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	RND1	Q92730	232 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	TAAR8	Q969N4	342 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	UTP4	Q969X6	686 aa	Known RBP	10.62	□□□□□ -0.71
APTX-233	ENST00000496030	CCDC124	Q96CT7	223 aa	Known RBP	10.62	□□□□□ -0.71
APTX-233	ENST00000496030	DDIT4L	Q96D03	193 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	SLC41A3	Q96GZ6	507 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	TM9SF2	Q99805	663 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	TMEM43	Q9BTV4	400 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	POLR2J2	Q9GZM3	115 aa	Known RBP	10.62	□□□□□ -0.71
APTX-233	ENST00000496030	POLR2J3	Q9H1A7	115 aa	Known RBP	10.62	□□□□□ -0.71
APTX-233	ENST00000496030	PAQR5	Q9NXK6	330 aa	Predicted RBP	10.62	□□□□□ -0.71
APTX-233	ENST00000496030	SLC7A8	Q9UHI5	535 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	SLC7A7	Q9UM01	511 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	POMP	Q9Y244	141 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	FREM1	Q5H8C1	2179 aa		10.62	□□□□□ -0.71
APTX-233	ENST00000496030	IGHV3-15	A0A0B4J1V0	119 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	DNPH1	O43598	174 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	RAMP1	O60894	148 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	THRB	P10828	461 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	FPR1	P21462	350 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	RASSF2	P50749	326 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	P2RY4	P51582	365 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	LSM11	P83369	360 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
APTX-233	ENST00000496030	PDSS1	Q5T2R2	415 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	CCDC121	Q6ZUS5	278 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	CHMP1B	Q7LBR1	199 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	LILRB4	Q8NHJ6	448 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	RNF128	Q8TEB7	428 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	CPNE4	Q96A23	557 aa	Predicted RBP	10.61	□□□□□ -0.71
APTX-233	ENST00000496030	MPP4	Q96JB8	637 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	PRRC1	Q96M27	445 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	TMUB1	Q9BVT8	246 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	MEPE	Q9NQ76	525 aa	Predicted RBP	10.61	□□□□□ -0.71
APTX-233	ENST00000496030	TIGAR	Q9NQ88	270 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	RHCG	Q9UBD6	479 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030		V9GYQ6	96 aa		10.61	□□□□□ -0.71
APTX-233	ENST00000496030	HSPB2	A8KAH6	182 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	CYTIP	O60759	359 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	TNFSF13	O75888	250 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	SYNGR4	O95473	234 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	IL2RA	P01589	272 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	BGLAP	P02818	100 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	AGA	P20933	346 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	PTN	P21246	168 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	IDUA	P35475	653 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	KIR2DL2	P43627	348 aa	Predicted RBP	10.6	□□□□□ -0.71
APTX-233	ENST00000496030	OR2B6	P58173	313 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	TAS2R41	P59536	307 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	CSNK2A1	P68400	391 aa	Predicted RBP	10.6	□□□□□ -0.71
APTX-233	ENST00000496030	HSPB2	Q16082	182 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	MTX3	Q5HYI7	312 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	FCRLA	Q7L513	359 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	PIWIL3	Q7Z3Z3	882 aa	Known RBP	10.6	□□□□□ -0.71
APTX-233	ENST00000496030	CCDC103	Q8IW40	242 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	OFCC1	Q8IZS5	231 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	GCNT2	Q8N0V5	402 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	PIK3C3	Q8NEB9	887 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	MFSD8	Q8NHS3	518 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	ABHD3	Q8WU67	409 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	TMEM255B	Q8WV15	326 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	SDCCAG3	Q96C92	435 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	INTS12	Q96CB8	462 aa	Known RBP	10.6	□□□□□ -0.71
APTX-233	ENST00000496030	DHRS1	Q96LJ7	313 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	ZNF300	Q96RE9	604 aa	Predicted RBP	10.6	□□□□□ -0.71
APTX-233	ENST00000496030	FUZ	Q9BT04	418 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	NMNAT1	Q9HAN9	279 aa	Predicted RBP	10.6	□□□□□ -0.71
APTX-233	ENST00000496030	IL1RAP	Q9NPH3	570 aa		10.6	□□□□□ -0.71
APTX-233	ENST00000496030	MCTS1	Q9ULC4	181 aa	Known RBP	10.6	□□□□□ -0.71
APTX-233	ENST00000496030	TRAV36DV7	A0A075B6V5	113 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030		A0A1W2PNV4	684 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	AQP12B	A6NM10	295 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	ZNF716	A6NP11	495 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	LRRN3	E7EW58	273 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	hCG_2039718	K7EN88	272 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	DIRAS1	O95057	198 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	IL18BP	O95998	194 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	CGA	P01215	116 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	GPI	P06744	558 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	CRH	P06850	196 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	TMIGD3	P0DMS9	266 aa	Predicted RBP	10.59	□□□□□ -0.71
APTX-233	ENST00000496030	FCGR2A	P12318	317 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	CD99	P14209	185 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	RHCE	P18577	417 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	CTSS	P25774	331 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	CHRNB4	P30926	498 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	NTF4	P34130	210 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	MAGEA2	P43356	314 aa		10.59	□□□□□ -0.71
APTX-233	ENST00000496030	RPS5	P46782	204 aa	Known RBP	10.59	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms