RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 SPATA16Q9BXB7 569 aa3.13□□□□□ -1.91
NCKAP1-208ENST00000495619 SLC7A5P2Q9GIP4 190 aa3.13□□□□□ -1.91
NCKAP1-208ENST00000495619 RAB33BQ9H082 229 aa3.13□□□□□ -1.91
NCKAP1-208ENST00000495619 VPS37BQ9H9H4 285 aa3.13□□□□□ -1.91
NCKAP1-208ENST00000495619 ELOVL3Q9HB03 270 aa3.13□□□□□ -1.91
NCKAP1-208ENST00000495619 PRG3Q9Y2Y8 225 aaPredicted RBP3.13□□□□□ -1.91
NCKAP1-208ENST00000495619 ATP10AO60312 1499 aa3.13□□□□□ -1.91
NCKAP1-208ENST00000495619 G3V4G9 280 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 KIF2AO00139 706 aaPredicted RBP3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 XPO1O14980 1071 aaKnown RBP3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 TPST2O60704 377 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 GIPP09681 153 aaPredicted RBP3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 ATP6V1C1P21283 382 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 UQCRC2P22695 453 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 PBLDP30039 288 aaPredicted RBP3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 YWHABP31946 246 aaKnown RBP3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 PTGDSP41222 190 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 MNAT1P51948 309 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 TAS2R19P59542 299 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 RPS14P62263 151 aaKnown RBP3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 EIF4EBP1Q13541 118 aaPredicted RBP3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 MESDQ14696 234 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 NRF1Q16656 503 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 TPD52L1Q16890 204 aaPredicted RBP3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 AP1ARQ63HQ0 302 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 SLC25A24Q6NUK1 477 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 MOB3BQ86TA1 216 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 MYOCDQ8IZQ8 938 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 ZNF561Q8N587 486 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 OR51S1Q8NGJ8 323 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 OR52K2Q8NGK3 314 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 OR56B4Q8NH76 319 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 CNDP1Q96KN2 507 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 SENP8Q96LD8 212 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 OR2M2Q96R28 347 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 KCNA7Q96RP8 456 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 KLHDC3Q9BQ90 382 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 ALG12Q9BV10 488 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 SELENOIQ9C0D9 397 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 NXF5Q9H1B4 397 aaKnown RBP3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 EML4Q9HC35 981 aaKnown RBP3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 PHF11Q9UIL8 331 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 HPCAL4Q9UM19 191 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 KIF16BQ96L93 1317 aa3.12□□□□□ -1.91
NCKAP1-208ENST00000495619 IGHV3OR16-13A0A075B7E8 117 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 ARPC4-TTLL3A0A0A6YYG9 625 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 MBLAC1A4D2B0 266 aaPredicted RBP3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 ERVV-1B6SEH8 477 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 CXCL13O43927 109 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 LRATO95237 230 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 PLEKP08567 350 aaPredicted RBP3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 CCDC172P0C7W6 258 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 POLR2EP19388 210 aaKnown RBP3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 MAGP20916 626 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 CD9P21926 228 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 MAGEA8P43361 318 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 DAP3P51398 398 aaKnown RBP3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 SYCP1Q15431 976 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 PPP1R7Q15435 360 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 PDK4Q16654 411 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 SLC25A52Q3SY17 297 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 FILIP1LQ4L180 1135 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 CAVIN4Q5BKX8 364 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 CCDC183Q5T5S1 534 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 C11orf71Q6IPW1 123 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 C6orf89Q6UWU4 347 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 ANGPTL8Q6UXH0 198 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 C6orf120Q7Z4R8 191 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 MTERF4Q7Z6M4 381 aaKnown RBP3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 NKAPP1Q8N9T2 125 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 GMCL1P1Q8NEA9 526 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 DUSP18Q8NEJ0 188 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 STXBP6Q8NFX7 210 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 RLN3Q8WXF3 142 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 CHCHD10Q8WYQ3 142 aaPredicted RBP3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 THRSPQ92748 146 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 PELI1Q96FA3 418 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 CTRCQ99895 268 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 SCRT1Q9BWW7 348 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 IQCGQ9H095 443 aaKnown RBP3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 NCOR1P1Q9H4R4 102 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 RMND5AQ9H871 391 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 NECAP2Q9NVZ3 263 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 TRAF3IP3Q9Y228 551 aa3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 AK6Q9Y3D8 172 aaKnown RBP3.11□□□□□ -1.91
NCKAP1-208ENST00000495619 AP3B1O00203 1094 aa3.1□□□□□ -1.91
NCKAP1-208ENST00000495619 DLGAP1O14490 977 aa3.1□□□□□ -1.91
NCKAP1-208ENST00000495619 RIPK2O43353 540 aa3.1□□□□□ -1.91
NCKAP1-208ENST00000495619 FAM189A1O60320 539 aa3.1□□□□□ -1.91
NCKAP1-208ENST00000495619 PALMO75781 387 aa3.1□□□□□ -1.91
NCKAP1-208ENST00000495619 LGI1O95970 557 aa3.1□□□□□ -1.91
NCKAP1-208ENST00000495619 IQCF3P0C7M6 154 aa3.1□□□□□ -1.91
NCKAP1-208ENST00000495619 CRISP2P16562 243 aa3.1□□□□□ -1.91
NCKAP1-208ENST00000495619 HNRNPA2B1P22626 353 aaKnown RBP3.1□□□□□ -1.91
NCKAP1-208ENST00000495619 MMP11P24347 488 aa3.1□□□□□ -1.91
NCKAP1-208ENST00000495619 RDXP35241 583 aaKnown RBP3.1□□□□□ -1.91
NCKAP1-208ENST00000495619 SULT1E1P49888 294 aa3.1□□□□□ -1.91
NCKAP1-208ENST00000495619 CBX1P83916 185 aa3.1□□□□□ -1.91
NCKAP1-208ENST00000495619 TP53I3Q53FA7 332 aa3.1□□□□□ -1.91
NCKAP1-208ENST00000495619 CCDC122Q5T0U0 273 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms