RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 LGI1O95970 557 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 SHBGP04278 402 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 TACSTD2P09758 323 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 IFNGR1P15260 489 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 NPR2P20594 1047 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 CXCR1P25024 350 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 IL2RGP31785 369 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 CHI3L1P36222 383 aaPredicted RBP12.38□□□□□ -0.43
VARS-228ENST00000495010 ACTG1P63261 375 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 SCGB2A2Q13296 93 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 ZSWIM7Q19AV6 140 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 SPATA21Q7Z572 469 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 CMIPQ8IY22 773 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 TMEM99Q8N816 258 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 CNOT9Q92600 299 aaKnown RBP12.38□□□□□ -0.43
VARS-228ENST00000495010 ZG16BQ96DA0 208 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 BOD1Q96IK1 185 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 ANKRD27Q96NW4 1050 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 TAPBPLQ9BX59 468 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 TXLNGYQ9BZA5 131 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 PIF1Q9H611 641 aa12.38□□□□□ -0.43
VARS-228ENST00000495010 NOP53Q9NZM5 478 aaKnown RBP12.38□□□□□ -0.43
VARS-228ENST00000495010 A0A096LPE4 126 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 ARPC4-TTLL3A0A0A6YYG9 625 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 A0A1W2PPZ6 126 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 SH3PXD2BA1X283 911 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 ZC3H12DA2A288 527 aaKnown RBP12.37□□□□□ -0.43
VARS-228ENST00000495010 CFAP73A6NFT4 308 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 LILRA1O75019 489 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 CECR9P0C854 216 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 DVL1P1P54792 670 aaPredicted RBP12.37□□□□□ -0.43
VARS-228ENST00000495010 CDH15P55291 814 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 TUBA1BP68363 451 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 TUBA4AP68366 448 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 EMX2Q04743 252 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 ADRM1Q16186 407 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 C3orf36Q3SXR2 165 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 ANXA8L1Q5VT79 327 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 ZCCHC23Q6ZST2 131 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 TUBA1AQ71U36 451 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 GLCCI1Q86VQ1 547 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 ZNF786Q8N393 782 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 SVOPLQ8N434 492 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 ZIC4Q8N9L1 334 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 NUP37Q8NFH4 326 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 UBASH3BQ8TF42 649 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 ZFAND2BQ8WV99 257 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 ZMYND19Q96E35 227 aaPredicted RBP12.37□□□□□ -0.43
VARS-228ENST00000495010 ZNF317Q96PQ6 595 aaPredicted RBP12.37□□□□□ -0.43
VARS-228ENST00000495010 MECRQ9BV79 373 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 DPY30Q9C005 99 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 METTL17Q9H7H0 456 aaPredicted RBP12.37□□□□□ -0.43
VARS-228ENST00000495010 MARCOQ9UEW3 520 aaPredicted RBP12.37□□□□□ -0.43
VARS-228ENST00000495010 ANK2Q01484 3957 aa12.37□□□□□ -0.43
VARS-228ENST00000495010 PRSS51A0A1B0GVH4 220 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 LIPT2A6NK58 231 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 AQP7P3A6NL99 342 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 NR5A2O00482 541 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 VAMP5O95183 116 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 HOXB1P14653 301 aaPredicted RBP12.36□□□□□ -0.43
VARS-228ENST00000495010 IL7RP16871 459 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 CALCRP30988 508 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 THBS4P35443 961 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 SERPINB5P36952 375 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 ANXA11P50995 505 aaKnown RBP12.36□□□□□ -0.43
VARS-228ENST00000495010 FUT5Q11128 374 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 CCNIQ14094 377 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 GSTA3Q16772 222 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 AP1ARQ63HQ0 302 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 SAXO2Q658L1 398 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 NIPAL3Q6P499 406 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 SHQ1Q6PI26 577 aaKnown RBP12.36□□□□□ -0.43
VARS-228ENST00000495010 ANKRD46Q86W74 232 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 ZCCHC24Q8N2G6 241 aaKnown RBP12.36□□□□□ -0.43
VARS-228ENST00000495010 C3orf56Q8N813 242 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 OR8J2Q8NGG1 315 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 EPS8L3Q8TE67 593 aaKnown RBP12.36□□□□□ -0.43
VARS-228ENST00000495010 BCL2L2Q92843 193 aaPredicted RBP12.36□□□□□ -0.43
VARS-228ENST00000495010 APOPT1Q96IL0 206 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 ALKBH3Q96Q83 286 aaPredicted RBP12.36□□□□□ -0.43
VARS-228ENST00000495010 RHOXF2Q9BQY4 288 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 ZNF442Q9H7R0 627 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 ADPRHL2Q9NX46 363 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 CRNNQ9UBG3 495 aaPredicted RBP12.36□□□□□ -0.43
VARS-228ENST00000495010 ZDHHC2Q9UIJ5 367 aa12.36□□□□□ -0.43
VARS-228ENST00000495010 SVEP1Q4LDE5 3571 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 B4DSR2 109 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 FAAHO00519 579 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 VENTXO95231 258 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 ADRA2AP08913 450 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 SELENOPP49908 381 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 SH3BGRP55822 239 aaPredicted RBP12.35□□□□□ -0.43
VARS-228ENST00000495010 COPZ1P61923 177 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 IL1RL1Q01638 556 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 LGALS3BPQ08380 585 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 TRIP10Q15642 601 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 GSPT2Q8IYD1 628 aaKnown RBP12.35□□□□□ -0.43
VARS-228ENST00000495010 ZNF440Q8IYI8 595 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 SGMS2Q8NHU3 365 aa12.35□□□□□ -0.43
VARS-228ENST00000495010 MAGEE2Q8TD90 523 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms