RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CDH2P19022 906 aaPredicted RBP8.44□□□□□ -1.06
MSH5-218ENST00000494646 PCSK6P29122 969 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 SLC16A1P53985 500 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 AQP5P55064 265 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 STX1BP61266 288 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 SLC17A1Q14916 467 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 CLEC12BQ2HXU8 276 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 PGGHGQ32M88 737 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 TTMPQ5BVD1 217 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 PAGE3Q5JUK9 113 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 SWT1Q5T5J6 900 aaKnown RBP8.44□□□□□ -1.06
MSH5-218ENST00000494646 TMEM225Q6GV28 225 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 MSANTD1Q6ZTZ1 278 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 P2RY8Q86VZ1 359 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 ZNF440Q8IYI8 595 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 C10orf111Q8N326 155 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 ZIC4Q8N9L1 334 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 WDR31Q8NA23 367 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 PLPP7Q8NBV4 271 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 DYDC1Q8WWB3 177 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 SLC25A36Q96CQ1 311 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 THOC1Q96FV9 657 aaKnown RBP8.44□□□□□ -1.06
MSH5-218ENST00000494646 TRMT61AQ96FX7 289 aaKnown RBP8.44□□□□□ -1.06
MSH5-218ENST00000494646 ZNF385AQ96PM9 386 aaKnown RBP8.44□□□□□ -1.06
MSH5-218ENST00000494646 SPATA9Q9BWV2 254 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 RSPO3Q9BXY4 272 aaPredicted RBP8.44□□□□□ -1.06
MSH5-218ENST00000494646 TRIM2Q9C040 744 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 PARPBPQ9NWS1 579 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 ADPRHL2Q9NX46 363 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 GDF2Q9UK05 429 aaPredicted RBP8.44□□□□□ -1.06
MSH5-218ENST00000494646 IFT52Q9Y366 437 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 SLC25A15Q9Y619 301 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 DSPPQ9NZW4 1301 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 SVEP1Q4LDE5 3571 aa8.44□□□□□ -1.06
MSH5-218ENST00000494646 YLPM1P49750 1951 aaKnown RBP8.44□□□□□ -1.06
MSH5-218ENST00000494646 FN1P02751 2386 aaKnown RBP8.43□□□□□ -1.06
MSH5-218ENST00000494646 hCG_2014768A0A024R1R8 64 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 A0A096LPI6 279 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 FAM171A2A8MVW0 826 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 E7EQL1 145 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 RNF223E7ERA6 249 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 TGDSO95455 350 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 ACVR1BP36896 505 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 MAP2K6P52564 334 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 CDH11P55287 796 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 SPOCK1Q08629 439 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 AGKQ53H12 422 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 RNF220Q5VTB9 566 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 BLOC1S3Q6QNY0 202 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 SLC22A25Q6T423 547 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 PAQR6Q6TCH4 344 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 AAED1Q7RTV5 226 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 MSRB3Q8IXL7 192 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 GOLGA6L1Q8N7Z2 621 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 OR9K2Q8NGE7 335 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 NFKBIDQ8NI38 313 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 C3orf49Q96BT1 292 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 SPDL1Q96EA4 605 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 ATP6V1G3Q96LB4 118 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 C7orf26Q96N11 449 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 TAPBPLQ9BX59 468 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 RAD21L1Q9H4I0 556 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 ARMC7Q9H6L4 198 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 CACYBPQ9HB71 228 aaKnown RBP8.43□□□□□ -1.06
MSH5-218ENST00000494646 THUMPD1Q9NXG2 353 aaKnown RBP8.43□□□□□ -1.06
MSH5-218ENST00000494646 TAS2R16Q9NYV7 291 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 SLC25A37Q9NYZ2 338 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 POU2F3Q9UKI9 436 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 SLC9A8Q9Y2E8 581 aa8.43□□□□□ -1.06
MSH5-218ENST00000494646 INAFM1C9JVW0 142 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 SSX4O60224 188 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 TPST1O60507 370 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 KRT33AO76009 404 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 THBS1P07996 1170 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 HOXB9P17482 250 aaPredicted RBP8.42□□□□□ -1.06
MSH5-218ENST00000494646 CBLP22681 906 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 PTAFRP25105 342 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 CD40P25942 277 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 RPS5P46782 204 aaKnown RBP8.42□□□□□ -1.06
MSH5-218ENST00000494646 SELENOPP49908 381 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 FABP6P51161 128 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 LGALS3BPQ08380 585 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 VEZF1Q14119 521 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 ZSWIM7Q19AV6 140 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 KRTAP21-3Q3LHN1 58 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 GLIPR1L2Q4G1C9 344 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 C1orf140Q5VVS0 124 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 OR7E24Q6IFN5 339 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 KLHL17Q6TDP4 642 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 TMEM108Q6UXF1 575 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 CREB3L2Q70SY1 520 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 BBS10Q8TAM1 723 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 RNF217Q8TC41 542 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 HTRA1Q92743 480 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 KTI12Q96EK9 354 aaPredicted RBP8.42□□□□□ -1.06
MSH5-218ENST00000494646 RADILQ96JH8 1075 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 CCDC28BQ9BUN5 200 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 TRAF4Q9BUZ4 470 aaPredicted RBP8.42□□□□□ -1.06
MSH5-218ENST00000494646 SLCO5A1Q9H2Y9 848 aa8.42□□□□□ -1.06
MSH5-218ENST00000494646 BCL2L10Q9HD36 194 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms