RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 MALT1Q9UDY8 824 aa29.29■■■□□ 2.28
CBX4-203ENST00000494546 SLC13A4Q9UKG4 626 aa29.29■■■□□ 2.28
CBX4-203ENST00000494546 HS3ST1O14792 307 aa29.28■■■□□ 2.28
CBX4-203ENST00000494546 NPIPB7O75200 414 aa29.28■■■□□ 2.28
CBX4-203ENST00000494546 SERPINB7O75635 380 aa29.28■■■□□ 2.28
CBX4-203ENST00000494546 HTR2AP28223 471 aa29.28■■■□□ 2.28
CBX4-203ENST00000494546 SEZ6L2Q6UXD5 910 aa29.28■■■□□ 2.28
CBX4-203ENST00000494546 ARMC8Q8IUR7 673 aa29.28■■■□□ 2.28
CBX4-203ENST00000494546 C11orf65Q8NCR3 313 aa29.28■■■□□ 2.28
CBX4-203ENST00000494546 PRR14Q9BWN1 585 aa29.28■■■□□ 2.28
CBX4-203ENST00000494546 TAS2R16Q9NYV7 291 aa29.28■■■□□ 2.28
CBX4-203ENST00000494546 A0A1B0GWA3 101 aa29.27■■■□□ 2.28
CBX4-203ENST00000494546 OR5H1A6NKK0 313 aa29.27■■■□□ 2.28
CBX4-203ENST00000494546 VIMP08670 466 aaKnown RBP29.27■■■□□ 2.28
CBX4-203ENST00000494546 FOXG1P55316 489 aaPredicted RBP29.27■■■□□ 2.28
CBX4-203ENST00000494546 NCALDP61601 193 aa29.27■■■□□ 2.28
CBX4-203ENST00000494546 BSPH1Q075Z2 132 aa29.27■■■□□ 2.28
CBX4-203ENST00000494546 P2RY8Q86VZ1 359 aa29.27■■■□□ 2.28
CBX4-203ENST00000494546 PTOV1Q86YD1 416 aa29.27■■■□□ 2.28
CBX4-203ENST00000494546 KRTAP1-3Q8IUG1 177 aa29.27■■■□□ 2.28
CBX4-203ENST00000494546 SLC25A36Q96CQ1 311 aa29.27■■■□□ 2.28
CBX4-203ENST00000494546 ZNF385AQ96PM9 386 aaKnown RBP29.27■■■□□ 2.28
CBX4-203ENST00000494546 TRIM2Q9C040 744 aa29.27■■■□□ 2.28
CBX4-203ENST00000494546 RAI1Q7Z5J4 1906 aaPredicted RBP29.27■■■□□ 2.28
CBX4-203ENST00000494546 ARHGEF9O43307 516 aa29.26■■■□□ 2.27
CBX4-203ENST00000494546 RPS5P46782 204 aaKnown RBP29.26■■■□□ 2.27
CBX4-203ENST00000494546 ARFIP2P53365 341 aa29.26■■■□□ 2.27
CBX4-203ENST00000494546 RGS8P57771 180 aaPredicted RBP29.26■■■□□ 2.27
CBX4-203ENST00000494546 TSPO2Q5TGU0 170 aa29.26■■■□□ 2.27
CBX4-203ENST00000494546 C9orf135Q5VTT2 229 aa29.26■■■□□ 2.27
CBX4-203ENST00000494546 SHEQ5VZ18 495 aa29.26■■■□□ 2.27
CBX4-203ENST00000494546 AAED1Q7RTV5 226 aa29.26■■■□□ 2.27
CBX4-203ENST00000494546 LRRC75A-AS1Q8N1F1 130 aa29.26■■■□□ 2.27
CBX4-203ENST00000494546 LSMEM1Q8N8F7 131 aa29.26■■■□□ 2.27
CBX4-203ENST00000494546 ZIC4Q8N9L1 334 aa29.26■■■□□ 2.27
CBX4-203ENST00000494546 BHLHE22Q8NFJ8 381 aaPredicted RBP29.26■■■□□ 2.27
CBX4-203ENST00000494546 TMEM45BQ96B21 275 aa29.26■■■□□ 2.27
CBX4-203ENST00000494546 PERPQ96FX8 193 aa29.26■■■□□ 2.27
CBX4-203ENST00000494546 SLC7A10Q9NS82 523 aa29.26■■■□□ 2.27
CBX4-203ENST00000494546 DPRXA6NFQ7 191 aa29.25■■■□□ 2.27
CBX4-203ENST00000494546 EGR4Q05215 589 aa29.25■■■□□ 2.27
CBX4-203ENST00000494546 DMTNQ08495 405 aa29.25■■■□□ 2.27
CBX4-203ENST00000494546 RBBP4Q09028 425 aa29.25■■■□□ 2.27
CBX4-203ENST00000494546 HSP90B2PQ58FF3 399 aa29.25■■■□□ 2.27
CBX4-203ENST00000494546 Q5PR19 223 aa29.25■■■□□ 2.27
CBX4-203ENST00000494546 C6orf89Q6UWU4 347 aa29.25■■■□□ 2.27
CBX4-203ENST00000494546 ZNF611Q8N823 705 aa29.25■■■□□ 2.27
CBX4-203ENST00000494546 SMYD1Q8NB12 490 aa29.25■■■□□ 2.27
CBX4-203ENST00000494546 OR52N5Q8NH56 324 aa29.25■■■□□ 2.27
CBX4-203ENST00000494546 MFSD8Q8NHS3 518 aa29.25■■■□□ 2.27
CBX4-203ENST00000494546 DNAJA4Q8WW22 397 aaPredicted RBP29.25■■■□□ 2.27
CBX4-203ENST00000494546 KTI12Q96EK9 354 aaPredicted RBP29.25■■■□□ 2.27
CBX4-203ENST00000494546 PTDSS2Q9BVG9 487 aa29.25■■■□□ 2.27
CBX4-203ENST00000494546 C12orf10Q9HB07 376 aa29.25■■■□□ 2.27
CBX4-203ENST00000494546 MFN2O95140 757 aa29.24■■■□□ 2.27
CBX4-203ENST00000494546 ITGA5P08648 1049 aa29.24■■■□□ 2.27
CBX4-203ENST00000494546 GTF2E2P29084 291 aaKnown RBP29.24■■■□□ 2.27
CBX4-203ENST00000494546 P2RY4P51582 365 aa29.24■■■□□ 2.27
CBX4-203ENST00000494546 GUCY1A3Q02108 690 aa29.24■■■□□ 2.27
CBX4-203ENST00000494546 ALG10BQ5I7T1 473 aa29.24■■■□□ 2.27
CBX4-203ENST00000494546 CGB2Q6NT52 195 aa29.24■■■□□ 2.27
CBX4-203ENST00000494546 SSX8Q7RTT4 187 aa29.24■■■□□ 2.27
CBX4-203ENST00000494546 RNF217Q8TC41 542 aa29.24■■■□□ 2.27
CBX4-203ENST00000494546 TMEM171Q8WVE6 324 aa29.24■■■□□ 2.27
CBX4-203ENST00000494546 TESQ9UGI8 421 aaKnown RBP29.24■■■□□ 2.27
CBX4-203ENST00000494546 DSCAMO60469 2012 aa29.23■■■□□ 2.27
CBX4-203ENST00000494546 FTCDNL1E5RQL4 147 aa29.23■■■□□ 2.27
CBX4-203ENST00000494546 FBP2O00757 339 aa29.23■■■□□ 2.27
CBX4-203ENST00000494546 KBTBD8Q8NFY9 601 aa29.23■■■□□ 2.27
CBX4-203ENST00000494546 LILRB1Q8NHL6 650 aaPredicted RBP29.23■■■□□ 2.27
CBX4-203ENST00000494546 NEUROG1Q92886 237 aa29.23■■■□□ 2.27
CBX4-203ENST00000494546 WFDC6Q9BQY6 131 aa29.23■■■□□ 2.27
CBX4-203ENST00000494546 PIF1Q9H611 641 aa29.23■■■□□ 2.27
CBX4-203ENST00000494546 KAT8Q9H7Z6 458 aaKnown RBP29.23■■■□□ 2.27
CBX4-203ENST00000494546 TMEM27Q9HBJ8 222 aa29.23■■■□□ 2.27
CBX4-203ENST00000494546 NPAP1Q9NZP6 1156 aa29.23■■■□□ 2.27
CBX4-203ENST00000494546 SELENONQ9NZV5 590 aa29.23■■■□□ 2.27
CBX4-203ENST00000494546 ROS1P08922 2347 aa29.23■■■□□ 2.27
CBX4-203ENST00000494546 MAP1AP78559 2803 aaPredicted RBP29.23■■■□□ 2.27
CBX4-203ENST00000494546 A0A1W2PR80 420 aa29.22■■■□□ 2.27
CBX4-203ENST00000494546 VAMP5O95183 116 aa29.22■■■□□ 2.27
CBX4-203ENST00000494546 OPN1SWP03999 348 aa29.22■■■□□ 2.27
CBX4-203ENST00000494546 PNMTP11086 282 aa29.22■■■□□ 2.27
CBX4-203ENST00000494546 PCBP3P57721 371 aaKnown RBP29.22■■■□□ 2.27
CBX4-203ENST00000494546 GABRA6Q16445 453 aa29.22■■■□□ 2.27
CBX4-203ENST00000494546 OR7E24Q6IFN5 339 aa29.22■■■□□ 2.27
CBX4-203ENST00000494546 ADAM5Q6NVV9 412 aa29.22■■■□□ 2.27
CBX4-203ENST00000494546 ULK3Q6PHR2 472 aa29.22■■■□□ 2.27
CBX4-203ENST00000494546 OR10A6Q8NH74 314 aa29.22■■■□□ 2.27
CBX4-203ENST00000494546 RASD1Q9Y272 281 aa29.22■■■□□ 2.27
CBX4-203ENST00000494546 M0QX08 132 aa29.21■■■□□ 2.27
CBX4-203ENST00000494546 PDLIM1O00151 329 aa29.21■■■□□ 2.27
CBX4-203ENST00000494546 OR1Q1Q15612 314 aa29.21■■■□□ 2.27
CBX4-203ENST00000494546 TRMT5Q32P41 509 aaKnown RBP29.21■■■□□ 2.27
CBX4-203ENST00000494546 CREB3L2Q70SY1 520 aa29.21■■■□□ 2.27
CBX4-203ENST00000494546 NET1Q7Z628 596 aaPredicted RBP29.21■■■□□ 2.27
CBX4-203ENST00000494546 SLC38A4Q969I6 547 aa29.21■■■□□ 2.27
CBX4-203ENST00000494546 FBXW5Q969U6 566 aa29.21■■■□□ 2.27
CBX4-203ENST00000494546 SLC47A1Q96FL8 570 aa29.21■■■□□ 2.27
CBX4-203ENST00000494546 MUS81Q96NY9 551 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms