RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 CIB1Q99828 191 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 QRSL1Q9H0R6 528 aaKnown RBP11.77□□□□□ -0.53
ERCC3-209ENST00000494464 DNAJB9Q9UBS3 223 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 CLEC4AQ9UMR7 237 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 EDARQ9UNE0 448 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 V9GYQ6 96 aa11.77□□□□□ -0.53
ERCC3-209ENST00000494464 DSPPQ9NZW4 1301 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 MAGEA13PA6NCF6 341 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 C16orf97H3BN30 126 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 BCAS1O75363 584 aaPredicted RBP11.76□□□□□ -0.53
ERCC3-209ENST00000494464 SEMG1P04279 462 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 KCNJ5P48544 419 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 IST1P53990 364 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 RAC3P60763 192 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 BLMHQ13867 455 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 PLEKHM3Q6ZWE6 761 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 FCRLAQ7L513 359 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 SLC43A2Q8N370 569 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 ABHD3Q8WU67 409 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 MED18Q9BUE0 208 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 FANCFQ9NPI8 374 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 SERINC1Q9NRX5 453 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 ZNF226Q9NYT6 803 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 CALML5Q9NZT1 146 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 KLHL13Q9P2N7 655 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 P2RX2Q9UBL9 471 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 OAZ3Q9UMX2 235 aa11.76□□□□□ -0.53
ERCC3-209ENST00000494464 SPIN1Q9Y657 262 aaPredicted RBP11.76□□□□□ -0.53
ERCC3-209ENST00000494464 SPG11Q96JI7 2443 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 SAC3D1A6NKF1 404 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 CLDN24A6NM45 220 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 FAAHO00519 579 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 SOCS2O14508 198 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 CASKO14936 926 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 DBIP07108 87 aaKnown RBP11.75□□□□□ -0.53
ERCC3-209ENST00000494464 ARAFP10398 606 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 NR2F1P10589 423 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 CRYGSP22914 178 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 APOBEC1P41238 236 aaKnown RBP11.75□□□□□ -0.53
ERCC3-209ENST00000494464 CRATP43155 626 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 ART1P52961 327 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 DSTNP60981 165 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 MERTKQ12866 999 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 GNA13Q14344 377 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 MAPK11Q15759 364 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 LRRC23Q53EV4 343 aaPredicted RBP11.75□□□□□ -0.53
ERCC3-209ENST00000494464 SYT14P1Q58G82 188 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 TMEM201Q5SNT2 666 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 BEND4Q6ZU67 534 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 CCDC80Q76M96 950 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 GRINAQ7Z429 371 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 STK32CQ86UX6 486 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 SVOPLQ8N434 492 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 GALNT4Q8N4A0 578 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 CBR4Q8N4T8 237 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 ROBO4Q8WZ75 1007 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 WFIKKN1Q96NZ8 548 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 SLC29A1Q99808 456 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 FOXC2Q99958 501 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 OR10A4Q9H209 315 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 CXXC4Q9H2H0 198 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 LIME1Q9H400 295 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 PLEKHF2Q9H8W4 249 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 MTHFD2LQ9H903 347 aaPredicted RBP11.75□□□□□ -0.53
ERCC3-209ENST00000494464 BCO1Q9HAY6 547 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 NTN4Q9HB63 628 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 THUMPD1Q9NXG2 353 aaKnown RBP11.75□□□□□ -0.53
ERCC3-209ENST00000494464 KLHL28Q9NXS3 571 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 KLHL9Q9P2J3 617 aa11.75□□□□□ -0.53
ERCC3-209ENST00000494464 A0A1W2PNR3 127 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 DEFB108AA8MXU0 73 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 ADAM11O75078 769 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 HPRP00739 348 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 NUDT7P0C024 238 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 ETFAP13804 333 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 PPP3CBP16298 524 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 DNASE1P24855 282 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 FKBP2P26885 142 aaKnown RBP11.74□□□□□ -0.53
ERCC3-209ENST00000494464 CRISP3P54108 245 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 PDK3Q15120 406 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 NRF1Q16656 503 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 HMGN2P46Q86SG4 172 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 PEX5LQ8IYB4 626 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 ATP6V1C2Q8NEY4 427 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 ZNF563Q8TA94 476 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 CNOT9Q92600 299 aaKnown RBP11.74□□□□□ -0.53
ERCC3-209ENST00000494464 MBD6Q96DN6 1003 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 OR5B2Q96R09 309 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 A4GALTQ9NPC4 353 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 CHRNA9Q9UGM1 479 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 ANGPT4Q9Y264 503 aa11.74□□□□□ -0.53
ERCC3-209ENST00000494464 A0A1W2PPR1 153 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 EI24O14681 340 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 SMAD9O15198 467 aaKnown RBP11.73□□□□□ -0.53
ERCC3-209ENST00000494464 SIAH2O43255 324 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 DNPH1O43598 174 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 CYTIPO60759 359 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 CST1P01037 141 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 MT-ND1P03886 318 aa11.73□□□□□ -0.53
ERCC3-209ENST00000494464 RAF1P04049 648 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms