RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SLC15A3Q8IY34 581 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 SLC43A2Q8N370 569 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 CNEP1R1Q8N9A8 125 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 BHLHE22Q8NFJ8 381 aaPredicted RBP7.8□□□□□ -1.16
ITGB1-217ENST00000494395 OR4D11Q8NGI4 311 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 TAMM41Q96BW9 452 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 REXO5Q96IC2 774 aaKnown RBP7.8□□□□□ -1.16
ITGB1-217ENST00000494395 ARHGDIGQ99819 225 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 ECSITQ9BQ95 431 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 PSD2Q9BQI7 771 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 RBM24Q9BX46 236 aaKnown RBP7.8□□□□□ -1.16
ITGB1-217ENST00000494395 POTEKPQ9BYX7 375 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 OPN3Q9H1Y3 402 aaPredicted RBP7.8□□□□□ -1.16
ITGB1-217ENST00000494395 PIF1Q9H611 641 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 EVA1AQ9H8M9 152 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 BCO1Q9HAY6 547 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 CACYBPQ9HB71 228 aaKnown RBP7.8□□□□□ -1.16
ITGB1-217ENST00000494395 TIGARQ9NQ88 270 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 KLHL13Q9P2N7 655 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 TESQ9UGI8 421 aaKnown RBP7.8□□□□□ -1.16
ITGB1-217ENST00000494395 TRAPPC4Q9Y296 219 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 SPIN1Q9Y657 262 aaPredicted RBP7.8□□□□□ -1.16
ITGB1-217ENST00000494395 ITPR2Q14571 2701 aa7.8□□□□□ -1.16
ITGB1-217ENST00000494395 ANKHD1Q8IWZ3 2542 aaKnown RBP7.8□□□□□ -1.16
ITGB1-217ENST00000494395 IGKV3D-15A0A087WSY6 115 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 A0A1B0GWA3 101 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 CCT8L1PA6NM43 557 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 ZNF716A6NP11 495 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 SULT2B1O00204 365 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 NME4O00746 187 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 AIM2O14862 343 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 FMO6PO60774 539 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 RAMP1O60894 148 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 SERPINB7O75635 380 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 LYPD3O95274 346 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 TFPIP10646 304 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 UQCRC1P31930 480 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 PEX19P40855 299 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 P2RY4P51582 365 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 CSNK2A1P68400 391 aaPredicted RBP7.79□□□□□ -1.16
ITGB1-217ENST00000494395 BNIP2Q12982 314 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 SNTB1Q13884 538 aaKnown RBP7.79□□□□□ -1.16
ITGB1-217ENST00000494395 PDK3Q15120 406 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 INTS11Q5TA45 600 aaKnown RBP7.79□□□□□ -1.16
ITGB1-217ENST00000494395 GTF2IRD2BQ6EKJ0 949 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 ERICH5Q6P6B1 374 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 TFAP2EQ6VUC0 442 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 NUFIP2Q7Z417 695 aaKnown RBP7.79□□□□□ -1.16
ITGB1-217ENST00000494395 GDF7Q7Z4P5 450 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 ARPINQ7Z6K5 226 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 PATL1Q86TB9 770 aaKnown RBP7.79□□□□□ -1.16
ITGB1-217ENST00000494395 GTF2IRD2Q86UP8 949 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 TSPYL5Q86VY4 417 aaPredicted RBP7.79□□□□□ -1.16
ITGB1-217ENST00000494395 TUSC5Q8IXB3 177 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 MICU2Q8IYU8 434 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 CADM2Q8N3J6 435 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 ANKS4BQ8N8V4 417 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 ZNF610Q8N9Z0 462 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 SMYD1Q8NB12 490 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 DDIT4LQ96D03 193 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 DNAJA3Q96EY1 480 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 ZNF300Q96RE9 604 aaPredicted RBP7.79□□□□□ -1.16
ITGB1-217ENST00000494395 PTDSS2Q9BVG9 487 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 PRRG4Q9BZD6 226 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 GSX1Q9H4S2 264 aaPredicted RBP7.79□□□□□ -1.16
ITGB1-217ENST00000494395 C12orf10Q9HB07 376 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 TMEM181Q9P2C4 612 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 ABCD2Q9UBJ2 740 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 KCNN3Q9UGI6 736 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 ARL2BPQ9Y2Y0 163 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 EMC9Q9Y3B6 208 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 APCP25054 2843 aa7.79□□□□□ -1.16
ITGB1-217ENST00000494395 IGKV1D-42A0A075B6H8 117 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 A0A0B4J2E0 115 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 A0A1B0GX12 115 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 LIPT2A6NK58 231 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 ZNF724A8MTY0 619 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 A8MVM7 634 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 FTCDNL1E5RQL4 147 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 M0R3H8 397 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 PRKD3O94806 890 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 PLGP00747 810 aaPredicted RBP7.78□□□□□ -1.16
ITGB1-217ENST00000494395 THY1P04216 161 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 YES1P07947 543 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 CCNA2P20248 432 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 CXCR1P25024 350 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 EDNRAP25101 427 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 CD79BP40259 229 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 SLC7A2P52569 658 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 SLC16A1P53985 500 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 CTBP2P56545 445 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 RGS8P57771 180 aaPredicted RBP7.78□□□□□ -1.16
ITGB1-217ENST00000494395 COPZ1P61923 177 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 FAM27E3Q08E93 113 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 RASGEF1BQ0VAM2 473 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 PPP4R4Q6NUP7 873 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 NLRC3Q7RTR2 1065 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 KIF18BQ86Y91 864 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 OR2T12Q8NG77 320 aa7.78□□□□□ -1.16
ITGB1-217ENST00000494395 OR6T1Q8NGN1 323 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms