RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 HIKESHIQ53FT3 197 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 C3orf38Q5JPI3 329 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 BLOC1S3Q6QNY0 202 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 ATRAIDQ6UW56 229 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 NRARPQ7Z6K4 114 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 PLXDC1Q8IUK5 500 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 DDIASQ8IXT1 998 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 CMIPQ8IY22 773 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 NLGN4XQ8N0W4 816 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 ZNF431Q8TF32 576 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-222ENST00000493919 TM9SF4Q92544 642 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 ZNF764Q96H86 408 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-222ENST00000493919 SLC12A9Q9BXP2 914 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 ALOXE3Q9BYJ1 711 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 NXF2Q9GZY0 626 aaKnown RBP10.68□□□□□ -0.7
BRCA1-222ENST00000493919 ACSS3Q9H6R3 686 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 NT5DC2Q9H857 520 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 WDR41Q9HAD4 459 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 TUBG2Q9NRH3 451 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 ZCCHC3Q9NUD5 404 aaKnown RBP10.68□□□□□ -0.7
BRCA1-222ENST00000493919 HRASLS2Q9NWW9 162 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 EGFL7Q9UHF1 273 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 ICKQ9UPZ9 632 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 IGHV5-10-1A0A0J9YXX1 117 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 CDRT15L2A8MXV6 281 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 ADAM10O14672 748 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 TYROBPO43914 113 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 SCN2BO60939 215 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 APOC3P02656 99 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 CATP04040 527 aaKnown RBP10.68□□□□□ -0.7
BRCA1-222ENST00000493919 ERCC1P07992 297 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-222ENST00000493919 NPSP0C0P6 89 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 DHRS4L1P0CG22 281 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 STAG3L2P0CL84 134 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 TAS2R39P59534 338 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 IL5RAQ01344 420 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 TRA2AQ13595 282 aaKnown RBP eCLIP10.68□□□□□ -0.7
BRCA1-222ENST00000493919 NDUFAF6Q330K2 333 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 RNLSQ5VYX0 342 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 C18orf63Q68DL7 685 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 TMEM71Q6P5X7 295 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 PLET1Q6UQ28 207 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 LHFPL2Q6ZUX7 228 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 TUSC5Q8IXB3 177 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 OFCC1Q8IZS5 231 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 C2orf73Q8N5S3 287 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-222ENST00000493919 PARP16Q8N5Y8 322 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 L3MBTL4Q8NA19 623 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 OR4D9Q8NGE8 314 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 OR8D4Q8NGM9 314 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 EEF1AKMT1Q8WVE0 214 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 NINJ1Q92982 152 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 C3orf49Q96BT1 292 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 PEX11GQ96HA9 241 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 IL17FQ96PD4 163 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 NODALQ96S42 347 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 ADI1Q9BV57 179 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 STRADBQ9C0K7 418 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 CACYBPQ9HB71 228 aaKnown RBP10.68□□□□□ -0.7
BRCA1-222ENST00000493919 DECR2Q9NUI1 292 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 NEUROG3Q9Y4Z2 214 aa10.68□□□□□ -0.7
BRCA1-222ENST00000493919 EXOC1LA0A1B0GW35 172 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 ATP6AP2A0A1C7CYW4 349 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 C1orf105O95561 183 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 IFNA17P01571 189 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 CLEC3BP05452 202 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 INHBAP08476 426 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 HGFP14210 728 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 ZNF37AP17032 561 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-222ENST00000493919 CCSMST1Q4G0I0 132 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.67□□□□□ -0.7
BRCA1-222ENST00000493919 DMRTA1Q5VZB9 504 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 LRRC8EQ6NSJ5 796 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 WDR74Q6RFH5 385 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-222ENST00000493919 TMEM108Q6UXF1 575 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 QSOX2Q6ZRP7 698 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 LMNTD1Q8N9Z9 388 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 ACOT11Q8WXI4 607 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-222ENST00000493919 RBP7Q96R05 134 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 PAFAH2Q99487 392 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 DGCR6LQ9BY27 220 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 ANGPTL4Q9BY76 406 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 TMEM138Q9NPI0 162 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 MKKSQ9NPJ1 570 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-222ENST00000493919 SEC14L3Q9UDX4 400 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 FBXL2Q9UKC9 423 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 TMEM184BQ9Y519 407 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-222ENST00000493919 WIF1Q9Y5W5 379 aa10.67□□□□□ -0.7
BRCA1-222ENST00000493919 GABRR3A8MPY1 467 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 SOCS6O14544 535 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 TP53I11O14683 189 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 RGS10O43665 173 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 MATN4O95460 622 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 CRYBA1P05813 215 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 RD3LP0DJH9 198 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 MPC1LP0DKB6 136 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 CCKBRP32239 447 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 RAB28P51157 221 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 IL2P60568 153 aa10.66□□□□□ -0.7
BRCA1-222ENST00000493919 SERTAD2Q14140 314 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms