RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 RNF6Q9Y252 685 aa15.97■□□□□ 0.15
PDLIM7-208ENST00000493815 FTCDNL1E5RQL4 147 aa15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 CIB2O75838 187 aa15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 RCBTB2O95199 551 aa15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 H1F0P07305 194 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 THRBP10828 461 aa15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 SPIBQ01892 262 aa15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 TRAM2Q15035 370 aa15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 FGD3Q5JSP0 725 aa15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 LIX1LQ8IVB5 337 aa15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 TMEM99Q8N816 258 aa15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 PIK3C3Q8NEB9 887 aa15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 RNF128Q8TEB7 428 aa15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 SDCCAG3Q96C92 435 aa15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 MAGIXQ9H6Y5 334 aa15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 C20orf141Q9NUB4 165 aa15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 PHF3Q92576 2039 aaKnown RBP15.96■□□□□ 0.15
PDLIM7-208ENST00000493815 TRBV4-1A0A0J9YWV2 114 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 TCRBV3S1A0A5B6 114 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 CH25HO95992 272 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 TMIGD3P0DMS9 266 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 FCGR2AP12318 317 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 CCNIQ14094 377 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 FAM69AQ5T7M9 428 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 RIPPLY2Q5TAB7 128 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 MTFR2Q6P444 385 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 MRGPRGQ86SM5 289 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 FAM26EQ8N5C1 309 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 MFSD8Q8NHS3 518 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 SLC7A13Q8TCU3 470 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 EPYCQ99645 322 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 CHID1Q9BWS9 393 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 ARHGAP21Q5T5U3 1957 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 A0A087WUU8 490 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 ERICH4A6NGS2 130 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 ENO4A6NNW6 628 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 ANKRD65E5RJM6 399 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 PLGP00747 810 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 BGLAPP02818 100 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 RAP2AP10114 183 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 BMP5P22003 454 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 RRM2P31350 389 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 MAGEA2P43356 314 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 SIRPAP78324 504 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 H3F3AP84243 136 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 OTUD3Q5T2D3 398 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 PODNL1Q6PEZ8 512 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 KDM8Q8N371 416 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 LRRC17Q8N6Y2 441 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 CNEP1R1Q8N9A8 125 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 ITLN2Q8WWU7 325 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 SLCO4A1Q96BD0 722 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 ZHX1-C8orf76Q96EF9 292 aa15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 RSRC1Q96IZ7 334 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 C6orf203Q9P0P8 240 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 ING1Q9UK53 422 aaPredicted RBP15.95■□□□□ 0.14
PDLIM7-208ENST00000493815 DOCK7Q96N67 2140 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 A0A1W2PRQ8 180 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 M0R082 166 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 OR2T1O43869 369 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 GRPRP30550 384 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 RBM34P42696 430 aaKnown RBP15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 RASGEF1BQ0VAM2 473 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 PPP1R8Q12972 351 aaKnown RBP15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 DGCR6Q14129 220 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 SEC23BQ15437 767 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 PAQR6Q6TCH4 344 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 C5orf46Q6UWT4 87 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 ZNF730Q6ZMV8 503 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 PIWIL3Q7Z3Z3 882 aaKnown RBP15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 MED12LQ86YW9 2145 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 MCEMP1Q8IX19 187 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 TUSC5Q8IXB3 177 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 NRMQ8IXM6 262 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 ZNF417Q8TAU3 575 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 ZNF587Q96SQ5 575 aaPredicted RBP15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 UCK2Q9BZX2 261 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 COQ3Q9NZJ6 369 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 MED31Q9Y3C7 131 aa15.94■□□□□ 0.14
PDLIM7-208ENST00000493815 A0A1W2PNV4 684 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 CLEC18AA5D8T8 446 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 HSPB2A8KAH6 182 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 DNPH1O43598 174 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 EIF1BO60739 113 aaKnown RBP15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 CYTIPO60759 359 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 TNFSF13O75888 250 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 GADD45GO95257 159 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 FUT1P19526 365 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 GTF2E2P29084 291 aaKnown RBP15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 KIR2DL2P43627 348 aaPredicted RBP15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 P2RY4P51582 365 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 SMSP52788 366 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 KPNB1Q14974 876 aaKnown RBP15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 HSPB2Q16082 182 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 ZNF74Q16587 644 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 ABLIM2Q6H8Q1 611 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 OR2A2Q6IF42 318 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 VWA1Q6PCB0 445 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 CLEC18BQ6UXF7 455 aa15.93■□□□□ 0.14
PDLIM7-208ENST00000493815 GPAT4Q86UL3 456 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms