RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 PDLIM1O00151 329 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 SSX4O60224 188 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 HNRNPCL1O60812 293 aaKnown RBP12.85□□□□□ -0.35
ATG4B-223ENST00000493618 THBS1P07996 1170 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 HNRNPCL4P0DMR1 293 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 RGNQ15493 299 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 ZNF311Q5JNZ3 666 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 RNF220Q5VTB9 566 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 OR7E24Q6IFN5 339 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 DTX2Q86UW9 622 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 ZIC4Q8N9L1 334 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 SPATA9Q9BWV2 254 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 TAPBPLQ9BX59 468 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 CACNG6Q9BXT2 260 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 REG4Q9BYZ8 158 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 CACYBPQ9HB71 228 aaKnown RBP12.85□□□□□ -0.35
ATG4B-223ENST00000493618 SLC17A5Q9NRA2 495 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 FAIMQ9NVQ4 179 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 ZNF232Q9UNY5 417 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 ATP23Q9Y6H3 246 aa12.85□□□□□ -0.35
ATG4B-223ENST00000493618 YLPM1P49750 1951 aaKnown RBP12.84□□□□□ -0.35
ATG4B-223ENST00000493618 AQP7P3A6NL99 342 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 A8MVM7 634 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 KIAA1324LA8MWY0 1029 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-223ENST00000493618 CLIC1O00299 241 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 KLF11O14901 512 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 PTAFRP25105 342 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 IDH3AP50213 366 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 FABP6P51161 128 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 STX1BP61266 288 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 IRX1P78414 480 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-223ENST00000493618 HIKESHIQ53FT3 197 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 C1orf140Q5VVS0 124 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 AGAP6Q5VW22 663 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 TMEM225Q6GV28 225 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 SSX8Q7RTT4 187 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 TMEM45BQ96B21 275 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 C3orf49Q96BT1 292 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 SLC25A36Q96CQ1 311 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 DHRS9Q9BPW9 319 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 EBF4Q9BQW3 602 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 SLCO1B3Q9NPD5 702 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 SLC25A37Q9NYZ2 338 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 SLAMF8Q9P0V8 285 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 DCTN4Q9UJW0 460 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 MGAT4BQ9UQ53 548 aa12.84□□□□□ -0.35
ATG4B-223ENST00000493618 A0A096LPI6 279 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 TMEM229AB2RXF0 380 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 C5orf58C9J3I9 102 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 NR5A2O00482 541 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 POLR3GO15318 223 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-223ENST00000493618 KRT33AO76009 404 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 HOXB9P17482 250 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-223ENST00000493618 MPGP29372 298 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 TTKP33981 857 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 SELENOPP49908 381 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 P2RY4P51582 365 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 MAP2K6P52564 334 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 ETFDHQ16134 617 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 AGBL2Q5U5Z8 902 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 C11orf71Q6IPW1 123 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 FUNDC1Q8IVP5 155 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 MSRB3Q8IXL7 192 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 FBXL14Q8N1E6 418 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 C10orf111Q8N326 155 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 KDM8Q8N371 416 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 GOLGA6L1Q8N7Z2 621 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 NFKBIDQ8NI38 313 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 LRRC8CQ8TDW0 803 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 RADILQ96JH8 1075 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 SF3B5Q9BWJ5 86 aaKnown RBP12.83□□□□□ -0.36
ATG4B-223ENST00000493618 RSPO3Q9BXY4 272 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-223ENST00000493618 AMBRA1Q9C0C7 1298 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 A4GALTQ9NPC4 353 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 TCF7L2Q9NQB0 619 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 CBLN4Q9NTU7 201 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 CCDC167Q9P0B6 97 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 SEC14L4Q9UDX3 406 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 AMDHD2Q9Y303 409 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 IFT52Q9Y366 437 aa12.83□□□□□ -0.36
ATG4B-223ENST00000493618 TLN2Q9Y4G6 2542 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 LGI1O95970 557 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 RPS5P46782 204 aaKnown RBP12.82□□□□□ -0.36
ATG4B-223ENST00000493618 NUDT6P53370 316 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 DMTNQ08495 405 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 PAGE3Q5JUK9 113 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 PRAMEF8Q5VWM4 474 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 PRAMEF7Q5VXH5 474 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 NIPAL3Q6P499 406 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 DNM1P46Q6ZS02 220 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 CREB3L2Q70SY1 520 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 LINGO2Q7L985 606 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 COMTD1Q86VU5 262 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 EPHX4Q8IUS5 362 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 DEPDC4Q8N2C3 294 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 MUC15Q8N387 334 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 C1orf162Q8NEQ5 155 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-223ENST00000493618 BBS10Q8TAM1 723 aa12.82□□□□□ -0.36
ATG4B-223ENST00000493618 ADAD1Q96M93 576 aaKnown RBP12.82□□□□□ -0.36
ATG4B-223ENST00000493618 C7orf26Q96N11 449 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms