RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 SEC22AQ96IW7 307 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 GNG8Q9UK08 70 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 A0A0D9SG52 128 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 OR5H14A6NHG9 310 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 EFCAB7A8K855 629 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 MAN2B1O00754 1011 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 OGG1O15527 345 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 RBBP9O75884 186 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 ZIC2O95409 532 aaPredicted RBP10.77□□□□□ -0.69
HDAC4-210ENST00000493582 ITPKBP27987 946 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 OR1D2P34982 312 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 CD96P40200 585 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 ANXA11P50995 505 aaKnown RBP10.77□□□□□ -0.69
HDAC4-210ENST00000493582 HABP2Q14520 560 aaPredicted RBP10.77□□□□□ -0.69
HDAC4-210ENST00000493582 WDR88Q6ZMY6 472 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 Q6ZVU0 165 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 LNX2Q8N448 690 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 ARL14EPQ8N8R7 260 aaPredicted RBP10.77□□□□□ -0.69
HDAC4-210ENST00000493582 HS6ST2Q96MM7 605 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 MS4A8Q9BY19 250 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 EXO5Q9H790 373 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 CMC2Q9NRP2 79 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 KLHL28Q9NXS3 571 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF337Q9Y3M9 751 aa10.77□□□□□ -0.69
HDAC4-210ENST00000493582 XIRP2A4UGR9 3374 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 TRAV27A0A087WT01 109 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 OR14I1A6ND48 311 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 FADS1O60427 444 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 PRLHRP49683 370 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 TAS2R38P59533 333 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 GUCA2AQ02747 115 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 HYAL4Q2M3T9 481 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 PLEKHN1Q494U1 663 aaPredicted RBP10.76□□□□□ -0.69
HDAC4-210ENST00000493582 MRM1Q6IN84 353 aaKnown RBP10.76□□□□□ -0.69
HDAC4-210ENST00000493582 MAMSTRQ6ZN01 415 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 OR13C2Q8NGS9 318 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 PAQR8Q8TEZ7 354 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 BRI3BPQ8WY22 251 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 CPNE2Q96FN4 548 aaPredicted RBP10.76□□□□□ -0.69
HDAC4-210ENST00000493582 CMTM3Q96MX0 182 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 OR7D2Q96RA2 312 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF334Q9HCZ1 680 aaPredicted RBP10.76□□□□□ -0.69
HDAC4-210ENST00000493582 V9GY05 133 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF879B4DU55 563 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 H7BY64 318 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 LATS1O95835 1130 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 CTSAP10619 480 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 ARFIP1P53367 373 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 TEAD2Q15562 447 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 TSC22D1Q15714 1073 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 FUT10Q6P4F1 479 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 USP53Q70EK8 1073 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 FAM122BQ7Z309 247 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 TMED4Q7Z7H5 227 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 LRRTM1Q86UE6 522 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 GLB1L2Q8IW92 636 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 KCNRGQ8N5I3 272 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 ELP5Q8TE02 316 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 SNX33Q8WV41 574 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 HAVCR1Q96D42 359 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 PPP1R16AQ96I34 528 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 PRAP1Q96NZ9 151 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 SPSB2Q99619 263 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 MACROD1Q9BQ69 325 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 TREM1Q9NP99 234 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 GHRLQ9UBU3 117 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 TAC3Q9UHF0 121 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 ASF1AQ9Y294 204 aa10.76□□□□□ -0.69
HDAC4-210ENST00000493582 LAMA2P24043 3122 aaKnown RBP10.76□□□□□ -0.69
HDAC4-210ENST00000493582 GREM1O60565 184 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 TBX19O60806 448 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 MAP2K5Q13163 448 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 RBM39Q14498 530 aaKnown RBP10.75□□□□□ -0.69
HDAC4-210ENST00000493582 SMCO1Q147U7 214 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 C9orf64Q5T6V5 341 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 CST9Q5W186 159 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 TXNDC8Q6A555 127 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 C22orf39Q6P5X5 142 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 UBE3DQ7Z6J8 389 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 NUDT13Q86X67 352 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 GLYATL1Q969I3 302 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 MARCH5Q9NX47 278 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 DTX4Q9Y2E6 619 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 SPTBP11277 2137 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF705EA8MWA4 302 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-210ENST00000493582 CCSO14618 274 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 PPP1R3DO95685 299 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 ANXA2P07355 339 aaKnown RBP10.75□□□□□ -0.69
HDAC4-210ENST00000493582 LAG3P18627 525 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 PSMB5P28074 263 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 PDX1P52945 283 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 PNLIPRP2P54317 469 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 ST8SIA6P61647 398 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 MPPED2Q15777 294 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 AKIRIN2Q53H80 203 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 TRAPPC5Q8IUR0 188 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 SDR9C7Q8NEX9 313 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 RAD51AP1Q96B01 352 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF285Q96NJ3 590 aa10.75□□□□□ -0.69
HDAC4-210ENST00000493582 OR51M1Q9H341 326 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms