RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 A0A1W2PNV4 684 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 NKX2-6A6NCS4 301 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 EEF1E1-BLOC1S5C9J1V9 151 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 SMAD9O15198 467 aaKnown RBP10.34□□□□□ -0.75
CTSA-209ENST00000493522 EEF1E1O43324 174 aaKnown RBP10.34□□□□□ -0.75
CTSA-209ENST00000493522 DNPH1O43598 174 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 OR5F1O95221 314 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 STAMBPO95630 424 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 IMPDH2P12268 514 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 KLK2P20151 261 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 ATP6V1B2P21281 511 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 GTF2E2P29084 291 aaKnown RBP10.34□□□□□ -0.75
CTSA-209ENST00000493522 OPRM1P35372 400 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 RPS5P46782 204 aaKnown RBP10.34□□□□□ -0.75
CTSA-209ENST00000493522 CTBP2P56545 445 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 SLC35A1P78382 337 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 TFF3Q07654 80 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 FOXD4Q12950 439 aaPredicted RBP10.34□□□□□ -0.75
CTSA-209ENST00000493522 BNIP1Q12981 228 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 OR7A5Q15622 319 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 SLC25A35Q3KQZ1 300 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 C5orf46Q6UWT4 87 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 CYP2R1Q6VVX0 501 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 TSPYL5Q86VY4 417 aaPredicted RBP10.34□□□□□ -0.75
CTSA-209ENST00000493522 LIX1LQ8IVB5 337 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 P3H2Q8IVL5 708 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 DMRTC2Q8IXT2 367 aaPredicted RBP10.34□□□□□ -0.75
CTSA-209ENST00000493522 FAM86B1Q8N7N1 296 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 RELL2Q8NC24 303 aaPredicted RBP10.34□□□□□ -0.75
CTSA-209ENST00000493522 LILRB4Q8NHJ6 448 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 STK35Q8TDR2 534 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 ABHD3Q8WU67 409 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 SLC38A4Q969I6 547 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 SLC7A6OSQ96CW6 309 aaPredicted RBP10.34□□□□□ -0.75
CTSA-209ENST00000493522 SLC41A3Q96GZ6 507 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 POM121Q96HA1 1249 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 PRRC1Q96M27 445 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 EPYCQ99645 322 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 BTBD10Q9BSF8 475 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 SFXN3Q9BWM7 321 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 POTEKPQ9BYX7 375 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 POLR2J2Q9GZM3 115 aaKnown RBP10.34□□□□□ -0.75
CTSA-209ENST00000493522 POLR2J3Q9H1A7 115 aaKnown RBP10.34□□□□□ -0.75
CTSA-209ENST00000493522 GORASP2Q9H8Y8 452 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 NPDC1Q9NQX5 325 aaPredicted RBP10.34□□□□□ -0.75
CTSA-209ENST00000493522 DCAF13Q9NV06 445 aaKnown RBP10.34□□□□□ -0.75
CTSA-209ENST00000493522 KCNN3Q9UGI6 736 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 EMC9Q9Y3B6 208 aa10.34□□□□□ -0.75
CTSA-209ENST00000493522 IGKV1D-42A0A075B6H8 117 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 TRAV36DV7A0A075B6V5 113 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 A0A087WUJ7 227 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 LIPT2A6NK58 231 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 KPNA4O00629 521 aaPredicted RBP10.33□□□□□ -0.76
CTSA-209ENST00000493522 ATP5HO75947 161 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 PRKD3O94806 890 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 GPIP06744 558 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 CRHP06850 196 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 FPR1P21462 350 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 IFNA8P32881 189 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 YAP1P46937 504 aaKnown RBP10.33□□□□□ -0.76
CTSA-209ENST00000493522 RASSF2P50749 326 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 EGR4Q05215 589 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 RASGEF1BQ0VAM2 473 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 PIN1Q13526 163 aaPredicted RBP10.33□□□□□ -0.76
CTSA-209ENST00000493522 RNPS1Q15287 305 aaKnown RBP10.33□□□□□ -0.76
CTSA-209ENST00000493522 GTF2IRD2BQ6EKJ0 949 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 ABLIM2Q6H8Q1 611 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 VWA1Q6PCB0 445 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 WDR88Q6ZMY6 472 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 GTF2IRD2Q86UP8 949 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 C10orf53Q8N6V4 93 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 PIGXQ8TBF5 258 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 MCUR1Q96AQ8 359 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 SLC25A36Q96CQ1 311 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 KTI12Q96EK9 354 aaPredicted RBP10.33□□□□□ -0.76
CTSA-209ENST00000493522 GMPPAQ96IJ6 420 aaPredicted RBP10.33□□□□□ -0.76
CTSA-209ENST00000493522 NAA11Q9BSU3 229 aaPredicted RBP10.33□□□□□ -0.76
CTSA-209ENST00000493522 UCK2Q9BZX2 261 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 AMBRA1Q9C0C7 1298 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 C6orf203Q9P0P8 240 aaPredicted RBP10.33□□□□□ -0.76
CTSA-209ENST00000493522 ACTR3BQ9P1U1 418 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 KLHL9Q9P2J3 617 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 TRAPPC4Q9Y296 219 aa10.33□□□□□ -0.76
CTSA-209ENST00000493522 ZNF814B7Z6K7 855 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 J3KTA2 159 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 hCG_2039718K7EN88 272 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 EIF1BO60739 113 aaKnown RBP10.32□□□□□ -0.76
CTSA-209ENST00000493522 CYTIPO60759 359 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 SS18L1O75177 396 aaPredicted RBP10.32□□□□□ -0.76
CTSA-209ENST00000493522 NPIPB7O75200 414 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 TNFSF13O75888 250 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 DNAJC8O75937 253 aaPredicted RBP10.32□□□□□ -0.76
CTSA-209ENST00000493522 SMNDC1O75940 238 aaKnown RBP eCLIP10.32□□□□□ -0.76
CTSA-209ENST00000493522 AKR7A3O95154 331 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 LYPD3O95274 346 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 IL18BPO95998 194 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 THY1P04216 161 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 CD99P14209 185 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 AGTR1P30556 359 aa10.32□□□□□ -0.76
CTSA-209ENST00000493522 DNAJA1P31689 397 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms