RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 KMT2CQ8NEZ4 4911 aaKnown RBP6.04□□□□□ -1.44
VPS52-219ENST00000493379 TRGV8A0A0C4DH27 118 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 CFAP73A6NFT4 308 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 NOTOA8MTQ0 251 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 FAM220BPB1ANY3 271 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 CCL21O00585 134 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 ZNF208O43345 1280 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 TPST1O60507 370 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 TPST2O60704 377 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 NPIPB7O75200 414 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 RCBTB2O95199 551 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 IL18BPO95998 194 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 CRHP06850 196 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 TPOP07202 933 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 UBTFL6P0CB48 400 aaPredicted RBP6.03□□□□□ -1.44
VPS52-219ENST00000493379 GLI4P10075 376 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 HSD17B1P14061 328 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 HTR1EP28566 365 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 KDELR2P33947 212 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 GCKP35557 465 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 CPOXP36551 454 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 HTR3AP46098 478 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 STARP49675 285 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 ZNF41P51814 821 aaPredicted RBP6.03□□□□□ -1.44
VPS52-219ENST00000493379 MNAT1P51948 309 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 IST1P53990 364 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 PER3P56645 1201 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 HPCAP84074 193 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 H3F3AP84243 136 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 TLE4Q04727 773 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 DMTNQ08495 405 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 SF3A3Q12874 501 aaKnown RBP eCLIP6.03□□□□□ -1.442e-6■■□□□ 13.5
VPS52-219ENST00000493379 ART3Q13508 389 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 CAPRIN1Q14444 709 aaKnown RBP6.03□□□□□ -1.44
VPS52-219ENST00000493379 QPRTQ15274 297 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 NRF1Q16656 503 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 DUSP7Q16829 419 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 ACSF3Q4G176 576 aaPredicted RBP6.03□□□□□ -1.44
VPS52-219ENST00000493379 ZNF311Q5JNZ3 666 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 MRPL2Q5T653 305 aaKnown RBP6.03□□□□□ -1.44
VPS52-219ENST00000493379 INTS11Q5TA45 600 aaKnown RBP6.03□□□□□ -1.44
VPS52-219ENST00000493379 EEF1A1P5Q5VTE0 462 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 CLEC9AQ6UXN8 241 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 B3GNT6Q6ZMB0 384 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 ZNF836Q6ZNA1 936 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 ESPNLQ6ZVH7 1005 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 PLEKHM3Q6ZWE6 761 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 ZNF550Q7Z398 422 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 GRINAQ7Z429 371 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 BIVMQ86UB2 503 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 COMTD1Q86VU5 262 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 VRK2Q86Y07 508 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 KRT73Q86Y46 540 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 LACC1Q8IV20 430 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 ZNF808Q8N4W9 903 aaPredicted RBP6.03□□□□□ -1.44
VPS52-219ENST00000493379 GATSQ8NAP1 163 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 CCDC197Q8NCU1 140 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 GPR32P1Q8NGA4 272 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 LILRB4Q8NHJ6 448 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 NFKBIDQ8NI38 313 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 BCAS4Q8TDM0 211 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 WDR60Q8WVS4 1066 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 RASSF5Q8WWW0 418 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 SFXN2Q96NB2 322 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 ARHGDIGQ99819 225 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 ECSITQ9BQ95 431 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 SLC39A3Q9BRY0 314 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 PINK1Q9BXM7 581 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 POTEKPQ9BYX7 375 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 FAM107BQ9H098 131 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 ARL8BQ9NVJ2 186 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 RLIMQ9NVW2 624 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 JKAMPQ9P055 326 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 ZNF629Q9UEG4 869 aaPredicted RBP6.03□□□□□ -1.44
VPS52-219ENST00000493379 DKKL1Q9UK85 242 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 ANGPT4Q9Y264 503 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 TRAPPC4Q9Y296 219 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 ZNF443Q9Y2A4 671 aaPredicted RBP6.03□□□□□ -1.44
VPS52-219ENST00000493379 ZNF175Q9Y473 711 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 KLF2Q9Y5W3 355 aaPredicted RBP6.03□□□□□ -1.44
VPS52-219ENST00000493379 NCOA6Q14686 2063 aaPredicted RBP6.03□□□□□ -1.44
VPS52-219ENST00000493379 NCKAP5O14513 1909 aa6.03□□□□□ -1.44
VPS52-219ENST00000493379 FREM3P0C091 2139 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 SVEP1Q4LDE5 3571 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 MED12Q93074 2177 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 A0A0J9YW62 118 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 ELOVL7A1L3X0 281 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 C5orf58C9J3I9 102 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 C19orf84I3L1E1 186 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 NME4O00746 187 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 AIM2O14862 343 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 ZNHIT1O43257 154 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 DNPH1O43598 174 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 AGFG1P52594 562 aaKnown RBP6.02□□□□□ -1.45
VPS52-219ENST00000493379 CLDN20P56880 219 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 RAC3P60763 192 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 PSME3P61289 254 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 FOXF1Q12946 379 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 SELENBP1Q13228 472 aa6.02□□□□□ -1.45
VPS52-219ENST00000493379 KIR3DS1Q14943 382 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms