RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	OR10S1	Q8NGN2	331 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	ZFP28	Q8NHY6	868 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	FAM76A	Q8TAV0	307 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	ACMSD	Q8TDX5	336 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	DDB2	Q92466	427 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	R3HDM4	Q96D70	268 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	TIMD4	Q96H15	378 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	SH3YL1	Q96HL8	342 aa	Predicted RBP	4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	METTL2A	Q96IZ6	378 aa	Known RBP	4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	MAP6	Q96JE9	813 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	NSUN5	Q96P11	429 aa	Known RBP	4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	PRDM13	Q9H4Q3	707 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	C16orf95	Q9H693	158 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	CNTD2	Q9H8S5	307 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	NOX4	Q9NPH5	578 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	GRHL1	Q9NZI5	618 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	DCTN4	Q9UJW0	460 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	GRID1	Q9ULK0	1009 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	PCDHA9	Q9Y5H5	950 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	INSIG2	Q9Y5U4	225 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	ACTL7B	Q9Y614	415 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	POMT1	Q9Y6A1	747 aa		4.55	□□□□□ -1.68
SEC13-219	ENST00000492602	HMX2	A2RU54	273 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	AGAP5	A6NIR3	686 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	TRIM49D1	C9J1S8	452 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	CLDN25	C9JDP6	229 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602		H3BNH8	94 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	SLC28A1	O00337	649 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	PPP6C	O00743	305 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	PCDH7	O60245	1069 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	KCNH1	O95259	989 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	UTS2	O95399	124 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	HSPA4L	O95757	839 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	PDYN	P01213	254 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	IGHM	P01871	453 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	LINGO3	P0C6S8	592 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	ELK4	P28324	431 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	MAPK1	P28482	360 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	NTF4	P34130	210 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	HSD17B3	P37058	310 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	RPL3	P39023	403 aa	Known RBP	4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	EIF1	P41567	113 aa	Known RBP	4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	MAGEB1	P43366	347 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	EVX1	P49640	407 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	UBE2N	P61088	152 aa	Known RBP	4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	TUBA1B	P68363	451 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	TUBA4A	P68366	448 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	PSG6	Q00889	435 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	SLC18A2	Q05940	514 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	BTK	Q06187	659 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	C2orf80	Q0P641	193 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	BST1	Q10588	318 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF155	Q12901	538 aa	Predicted RBP	4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	LCP2	Q13094	533 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	DAG1	Q14118	895 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	PRSS53	Q2L4Q9	553 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	ALKBH6	Q3KRA9	238 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	CCDC153	Q494R4	210 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	SLC48A1	Q6P1K1	146 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	CASP12	Q6UXS9	341 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	TUBA1A	Q71U36	451 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	C1orf174	Q8IYL3	243 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	FAM9C	Q8IZT9	166 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	NATD1	Q8N6N6	113 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	OR4F6	Q8NGB9	312 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	CDC26	Q8NHZ8	85 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	FBXO27	Q8NI29	283 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	WDR20	Q8TBZ3	569 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	TBC1D15	Q8TC07	691 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	ACTRT2	Q8TDY3	377 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	SSMEM1	Q8WWF3	244 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	RAB1C	Q92928	201 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	FAM71F1	Q96KD3	344 aa	Predicted RBP	4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	C16orf45	Q96MC5	204 aa	Predicted RBP	4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	PAFAH2	Q99487	392 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	KLHDC3	Q9BQ90	382 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	MRPL1	Q9BYD6	325 aa	Known RBP	4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	MMP28	Q9H239	520 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602		Q9N2J8	555 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	NPHS2	Q9NP85	383 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	OBP2B	Q9NPH6	170 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	SLC35C2	Q9NQQ7	365 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	FARSB	Q9NSD9	589 aa	Known RBP	4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	DDX18	Q9NVP1	670 aa	Known RBP	4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	PCTP	Q9UKL6	214 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	PYCARD	Q9ULZ3	195 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	HECTD4	Q9Y4D8	3996 aa		4.54	□□□□□ -1.68
SEC13-219	ENST00000492602	IGKV3D-15	A0A087WSY6	115 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	TMEM114	B3SHH9	223 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	MANBA	O00462	879 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	NR5A2	O00482	541 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	OR7A17	O14581	309 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	PLOD3	O60568	738 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	SEC22B	O75396	215 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	SKAP2	O75563	359 aa	Predicted RBP	4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	JTB	O76095	146 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	CELA3B	P08861	270 aa		4.53	□□□□□ -1.68
SEC13-219	ENST00000492602	ABHD2	P08910	425 aa		4.53	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms