RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 ENTPD8Q5MY95 495 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 PDSS1Q5T2R2 415 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 C5orf46Q6UWT4 87 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 CCDC121Q6ZUS5 278 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 OR10D3Q8NH80 312 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 ADAMTS16Q8TE57 1224 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 SLC38A4Q969I6 547 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 CCDC124Q96CT7 223 aaKnown RBP13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 DDIT4LQ96D03 193 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 SLC47A1Q96FL8 570 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 CLPTM1LQ96KA5 538 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 RBM24Q9BX46 236 aaKnown RBP13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 CADM1Q9BY67 442 aaKnown RBP13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 ABCA4P78363 2273 aa13.41□□□□□ -0.26
CDC42SE1-205ENST00000491825 A0A087WUJ7 227 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 TMEM72A0PK05 275 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 TRAPPC13A5PLN9 417 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 A8MVM7 634 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 ACOT8O14734 319 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 TNFSF11O14788 317 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 NPIPB7O75200 414 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 TNFSF13O75888 250 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 OR5F1O95221 314 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 RAF1P04049 648 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 SEMG1P04279 462 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 THRBP10828 461 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 FCGR2AP12318 317 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 OR1E2P47887 323 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 CDH12P55289 794 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 ADAM8P78325 824 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 TMEM176BQ3YBM2 270 aaPredicted RBP13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 HBMQ6B0K9 141 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 FKBP9P1Q75LS8 142 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 ASRGL1Q7L266 308 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 CHMP1BQ7LBR1 199 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 LUZP2Q86TE4 346 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 TSPYL5Q86VY4 417 aaPredicted RBP13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 DHFR2Q86XF0 187 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 GCNT2Q8N0V5 402 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 FAM86B1Q8N7N1 296 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 STK35Q8TDR2 534 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 CPNE4Q96A23 557 aaPredicted RBP13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 MCUR1Q96AQ8 359 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 INTS12Q96CB8 462 aaKnown RBP13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 MPP4Q96JB8 637 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 PRRC1Q96M27 445 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 PRR14Q9BWN1 585 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 POTEKPQ9BYX7 375 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 TIGARQ9NQ88 270 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 SELENONQ9NZV5 590 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 EDARQ9UNE0 448 aa13.4□□□□□ -0.26
CDC42SE1-205ENST00000491825 DNHD1Q96M86 4753 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 TCRBV5S2A0A599 114 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 SLC22A20A6NK97 555 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 ELOA3DA6NLF2 546 aaPredicted RBP13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 CPSF4LA6NMK7 179 aaKnown RBP13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 A8MXE2 369 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 FZD7O75084 574 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 PRKD3O94806 890 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 PMS2P2O95744 297 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 TGM6O95932 706 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 THY1P04216 161 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 HOXB4P17483 251 aaPredicted RBP13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 EIF1AXP47813 144 aaKnown RBP13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 RAC3P60763 192 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 CSNK2A1P68400 391 aaPredicted RBP13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 MS4A2Q01362 244 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 GABPB1Q06547 395 aaPredicted RBP13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 ZNF239Q16600 458 aaKnown RBP13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 DEFB113Q30KQ7 82 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 ELOA3BQ3SY89 546 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 LINC00114Q6XXX2 140 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 DEF8Q6ZN54 512 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 TMPPEQ6ZT21 453 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 ELOA3Q8NG57 546 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 PYURFQ96I23 114 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 ZNF845Q96IR2 970 aaPredicted RBP13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 DACH2Q96NX9 599 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 OR5B2Q96R09 309 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 TMEM43Q9BTV4 400 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 ZNF426Q9BUY5 554 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 TRIM15Q9C019 465 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 AMBRA1Q9C0C7 1298 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 PIGMQ9H3S5 423 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 SLC7A8Q9UHI5 535 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 TRAPPC4Q9Y296 219 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 DOCK7Q96N67 2140 aa13.39□□□□□ -0.27
CDC42SE1-205ENST00000491825 FLNAP21333 2647 aaKnown RBP13.38□□□□□ -0.27
CDC42SE1-205ENST00000491825 IGKV1D-42A0A075B6H8 117 aa13.38□□□□□ -0.27
CDC42SE1-205ENST00000491825 A0A1W2PNV4 684 aa13.38□□□□□ -0.27
CDC42SE1-205ENST00000491825 ZC3H12DA2A288 527 aaKnown RBP13.38□□□□□ -0.27
CDC42SE1-205ENST00000491825 CXCL13O43927 109 aa13.38□□□□□ -0.27
CDC42SE1-205ENST00000491825 PRSS23O95084 383 aa13.38□□□□□ -0.27
CDC42SE1-205ENST00000491825 LYPD3O95274 346 aa13.38□□□□□ -0.27
CDC42SE1-205ENST00000491825 STAMBPO95630 424 aa13.38□□□□□ -0.27
CDC42SE1-205ENST00000491825 OPN1LWP04000 364 aa13.38□□□□□ -0.27
CDC42SE1-205ENST00000491825 DIO1P49895 249 aa13.38□□□□□ -0.27
CDC42SE1-205ENST00000491825 CARD18P57730 90 aa13.38□□□□□ -0.27
CDC42SE1-205ENST00000491825 TAS2R41P59536 307 aa13.38□□□□□ -0.27
CDC42SE1-205ENST00000491825 EGR4Q05215 589 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms