RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 MAL2Q969L2 176 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 TMEM45BQ96B21 275 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 RADILQ96JH8 1075 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 ATP6V1G3Q96LB4 118 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 EBF4Q9BQW3 602 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 SF3B5Q9BWJ5 86 aaKnown RBP7.27□□□□□ -1.25
LSM2-213ENST00000491421 PIF1Q9H611 641 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 BCL2L10Q9HD36 194 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 SLCO1B3Q9NPD5 702 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 SLC7A10Q9NS82 523 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 ADPRHL2Q9NX46 363 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 CISD1Q9NZ45 108 aaKnown RBP7.27□□□□□ -1.25
LSM2-213ENST00000491421 CCDC167Q9P0B6 97 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 DCTN4Q9UJW0 460 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 POU2F3Q9UKI9 436 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 MGAT4BQ9UQ53 548 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 SLC25A15Q9Y619 301 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 NUP214P35658 2090 aaPredicted RBP7.27□□□□□ -1.25
LSM2-213ENST00000491421 ROS1P08922 2347 aa7.27□□□□□ -1.25
LSM2-213ENST00000491421 TMEM229AB2RXF0 380 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 M0R1B8 84 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 PDLIM1O00151 329 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 FRS3O43559 492 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 KRT33AO76009 404 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 AHSA1O95433 338 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 BMP2P12643 396 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 HOXB9P17482 250 aaPredicted RBP7.26□□□□□ -1.25
LSM2-213ENST00000491421 CD40P25942 277 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 HOXC5Q00444 222 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 SPOCK1Q08629 439 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 TNK1Q13470 666 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 GABRA6Q16445 453 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 CLEC12BQ2HXU8 276 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 TTMPQ5BVD1 217 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 LRIF1Q5T3J3 769 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 GCNT6Q5T4J0 391 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 TSPO2Q5TGU0 170 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 TMEM225Q6GV28 225 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 BLOC1S3Q6QNY0 202 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 AAED1Q7RTV5 226 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 GPAT4Q86UL3 456 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 FUNDC1Q8IVP5 155 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 DEPDC4Q8N2C3 294 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 C17orf78Q8N4C9 275 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 ZIC4Q8N9L1 334 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 C1orf162Q8NEQ5 155 aaPredicted RBP7.26□□□□□ -1.25
LSM2-213ENST00000491421 NFKBIDQ8NI38 313 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 C3orf49Q96BT1 292 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 SPDL1Q96EA4 605 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 HS6ST2Q96MM7 605 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 MUS81Q96NY9 551 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 ZNF385AQ96PM9 386 aaKnown RBP7.26□□□□□ -1.25
LSM2-213ENST00000491421 CCDC28BQ9BUN5 200 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 TRAF4Q9BUZ4 470 aaPredicted RBP7.26□□□□□ -1.25
LSM2-213ENST00000491421 C1QTNF6Q9BXI9 259 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 AMBRA1Q9C0C7 1298 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 SLCO5A1Q9H2Y9 848 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 SLC25A37Q9NYZ2 338 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 RPS6KB2Q9UBS0 482 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 AMDHD2Q9Y303 409 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 CHST2Q9Y4C5 530 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 RAI1Q7Z5J4 1906 aaPredicted RBP7.26□□□□□ -1.25
LSM2-213ENST00000491421 ZANQ9Y493 2812 aa7.26□□□□□ -1.25
LSM2-213ENST00000491421 ABCA2Q9BZC7 2435 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 ELOA3DA6NLF2 546 aaPredicted RBP7.25□□□□□ -1.25
LSM2-213ENST00000491421 NPIPB7O75200 414 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 VAMP5O95183 116 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 CD8AP01732 235 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 IGHV4-39P01824 125 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 ARAFP10398 606 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 ETS2P15036 469 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 CDH2P19022 906 aaPredicted RBP7.25□□□□□ -1.25
LSM2-213ENST00000491421 PTNP21246 168 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 PPIBP23284 216 aaKnown RBP7.25□□□□□ -1.25
LSM2-213ENST00000491421 GTF2E2P29084 291 aaKnown RBP7.25□□□□□ -1.25
LSM2-213ENST00000491421 PCSK6P29122 969 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 MPGP29372 298 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 PRKAR1BP31321 381 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 ACVR1BP36896 505 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 ATP4BP51164 291 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 IRX1P78414 480 aaPredicted RBP7.25□□□□□ -1.25
LSM2-213ENST00000491421 PPP2R2BQ00005 443 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 SQLEQ14534 574 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 ELOA3BQ3SY89 546 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 AGKQ53H12 422 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 PAGE3Q5JUK9 113 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 AGAP6Q5VW22 663 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 REEP3Q6NUK4 255 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 KLHL24Q6TFL4 600 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 ABHD12BQ7Z5M8 362 aaPredicted RBP7.25□□□□□ -1.25
LSM2-213ENST00000491421 DTX2Q86UW9 622 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 KRT73Q86Y46 540 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 MSRB3Q8IXL7 192 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 WDR31Q8NA23 367 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 POMGNT2Q8NAT1 580 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 ELOA3Q8NG57 546 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 MFSD8Q8NHS3 518 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 STK35Q8TDR2 534 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 SLC35B4Q969S0 331 aa7.25□□□□□ -1.25
LSM2-213ENST00000491421 SLC25A36Q96CQ1 311 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms