RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 WIPI2Q9Y4P8 454 aa11.65□□□□□ -0.54
EXOSC3-207ENST00000490516 NUP214P35658 2090 aaPredicted RBP11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 IGHV3OR16-10A0A075B7F0 116 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 CENPVL1A0A0U1RR11 272 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 MDFIC2A0A1B0GVS7 189 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 CLPSL1A2RUU4 121 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 TRIM49D1C9J1S8 452 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 NGFP01138 241 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 RBP1P09455 135 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 UBTFL6P0CB48 400 aaPredicted RBP11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 IMPDH2P12268 514 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 BCKDHAP12694 445 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 LOXL3P58215 753 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 SLC35A1P78382 337 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 CCL8P80075 99 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 HLXQ14774 488 aaPredicted RBP11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 SYT10Q6XYQ8 523 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 REC114Q7Z4M0 266 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 ADGRG3Q86Y34 549 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 NOA1Q8NC60 698 aaKnown RBP11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 GLB1L3Q8NCI6 653 aaPredicted RBP11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 FAM120BQ96EK7 910 aaKnown RBP11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 KTI12Q96EK9 354 aaPredicted RBP11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 ZNF317Q96PQ6 595 aaPredicted RBP11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 KCNA7Q96RP8 456 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 NAA11Q9BSU3 229 aaPredicted RBP11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 ZNF385DQ9H6B1 395 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 MOV10Q9HCE1 1003 aaKnown RBP11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 TNFRSF19Q9NS68 423 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 GRHL1Q9NZI5 618 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 C1RLQ9NZP8 487 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 KCNE5Q9UJ90 142 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 SNX24Q9Y343 169 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 AUP1Q9Y679 476 aa11.64□□□□□ -0.55
EXOSC3-207ENST00000490516 EPPK1P58107 5090 aaKnown RBP11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 A8MT66 165 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 HOXA3O43365 443 aaPredicted RBP11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 EIF1BO60739 113 aaKnown RBP11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 UPK3AO75631 287 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 RSL1D1O76021 490 aaKnown RBP11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 SEC14L2O76054 403 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 SELENOPP49908 381 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 SAMD5Q5TGI4 173 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 C11orf87Q6NUJ2 197 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 GPRIN3Q6ZVF9 776 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 MDP1Q86V88 176 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 ZFP28Q8NHY6 868 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 GATA5Q9BWX5 397 aaPredicted RBP11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 C1QTNF3Q9BXJ4 246 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 RASSF4Q9H2L5 321 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 SERHL2Q9H4I8 314 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 ZCCHC3Q9NUD5 404 aaKnown RBP11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 DUSP13Q9UII6 198 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 KLHL21Q9UJP4 597 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 LEF1Q9UJU2 399 aaPredicted RBP11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 CACNG2Q9Y698 323 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 BIRC6Q9NR09 4857 aa11.63□□□□□ -0.55
EXOSC3-207ENST00000490516 TMEM229AB2RXF0 380 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 CCDC188H7C350 402 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 BCAS1O75363 584 aaPredicted RBP11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 CSTAP01040 98 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 CRYBA1P05813 215 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 GSTA2P09210 222 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 SBK3P0C264 359 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 IGHV4-38-2P0DP08 117 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 HOXB1P14653 301 aaPredicted RBP11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 RYKP34925 604 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 ARR3P36575 388 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 MTNR1AP48039 350 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 CLK1P49759 484 aaKnown RBP11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 ARF1P84077 181 aaKnown RBP11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 ROR2Q01974 943 aaKnown RBP11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 GUCY2DQ02846 1103 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 ZNF154Q13106 437 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 GLIPR1L2Q4G1C9 344 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 NOXRED1Q6NXP6 359 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 PAQR6Q6TCH4 344 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 FIP1L1Q6UN15 594 aaKnown RBP11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 GPAT4Q86UL3 456 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 TMEM99Q8N816 258 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 IL17RDQ8NFM7 739 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 ZNF563Q8TA94 476 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 MS4A3Q96HJ5 214 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 ZNF382Q96SR6 550 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 GAL3ST1Q99999 423 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 IQCGQ9H095 443 aaKnown RBP11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 TCF7L1Q9HCS4 588 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 SIRT3Q9NTG7 399 aaPredicted RBP11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 PURGQ9UJV8 347 aaKnown RBP11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 NOX1Q9Y5S8 564 aa11.62□□□□□ -0.55
EXOSC3-207ENST00000490516 TET2Q6N021 2002 aaPredicted RBP11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 PPIAL4EA0A075B759 164 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 PPIAL4CA0A0B4J2A2 164 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 IGHV1-69-2A0A0G2JMI3 117 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 A0A1W2PPW3 197 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 PPIAL4DF5H284 164 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 ANKRD28O15084 1053 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 AKAP10O43572 662 aa11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 URI1O94763 535 aaPredicted RBP11.61□□□□□ -0.55
EXOSC3-207ENST00000490516 SUPT7LO94864 414 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms