RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 ATG16L1Q676U5 607 aa9.88□□□□□ -0.83
DUBR-204ENST00000490441 ZNF544Q6NX49 715 aa9.88□□□□□ -0.83
DUBR-204ENST00000490441 ABHD12BQ7Z5M8 362 aaPredicted RBP9.88□□□□□ -0.83
DUBR-204ENST00000490441 CADM2Q8N3J6 435 aa9.88□□□□□ -0.83
DUBR-204ENST00000490441 OR52P1PQ8NH57 321 aa9.88□□□□□ -0.83
DUBR-204ENST00000490441 MGARPQ8TDB4 240 aa9.88□□□□□ -0.83
DUBR-204ENST00000490441 C1QTNF6Q9BXI9 259 aa9.88□□□□□ -0.83
DUBR-204ENST00000490441 ARMC7Q9H6L4 198 aa9.88□□□□□ -0.83
DUBR-204ENST00000490441 WDR55Q9H6Y2 383 aaPredicted RBP9.88□□□□□ -0.83
DUBR-204ENST00000490441 RMND5AQ9H871 391 aa9.88□□□□□ -0.83
DUBR-204ENST00000490441 SLC7A10Q9NS82 523 aa9.88□□□□□ -0.83
DUBR-204ENST00000490441 PRDM4Q9UKN5 801 aa9.88□□□□□ -0.83
DUBR-204ENST00000490441 GPR45Q9Y5Y3 372 aa9.88□□□□□ -0.83
DUBR-204ENST00000490441 ATP23Q9Y6H3 246 aa9.88□□□□□ -0.83
DUBR-204ENST00000490441 CR1P17927 2039 aa9.88□□□□□ -0.83
DUBR-204ENST00000490441 STAB1Q9NY15 2570 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 TMEM120BA0PK00 339 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 ZC3H12DA2A288 527 aaKnown RBP9.87□□□□□ -0.83
DUBR-204ENST00000490441 CDHR4A6H8M9 788 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 LIPT2A6NK58 231 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 PDLIM1O00151 329 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 SLC22A3O75751 556 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 BCHEP06276 602 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 GKN3PP0CG01 181 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 NCF2P19878 526 aaPredicted RBP9.87□□□□□ -0.83
DUBR-204ENST00000490441 MPGP29372 298 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 NTF4P34130 210 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 FOXG1P55316 489 aaPredicted RBP9.87□□□□□ -0.83
DUBR-204ENST00000490441 PRPS1P60891 318 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 DSTNP60981 165 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 IRX1P78414 480 aaPredicted RBP9.87□□□□□ -0.83
DUBR-204ENST00000490441 CHRNB3Q05901 458 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 CEACAM7Q14002 265 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 LARS2Q15031 903 aaKnown RBP9.87□□□□□ -0.83
DUBR-204ENST00000490441 ZSWIM7Q19AV6 140 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 PDCD4Q53EL6 469 aaKnown RBP9.87□□□□□ -0.83
DUBR-204ENST00000490441 C6orf10Q5SRN2 563 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 C1QTNF12Q5T7M4 302 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 TSPO2Q5TGU0 170 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 TMEM225Q6GV28 225 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 WBP2NLQ6ICG8 309 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 ZNF836Q6ZNA1 936 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 DNM1P46Q6ZS02 220 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 AAED1Q7RTV5 226 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 GPAT4Q86UL3 456 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 POMGNT2Q8NAT1 580 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 OR9K2Q8NGE7 335 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 TMEM45BQ96B21 275 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 ITCHQ96J02 903 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 MDFIQ99750 246 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 SF3B5Q9BWJ5 86 aaKnown RBP9.87□□□□□ -0.83
DUBR-204ENST00000490441 AMBRA1Q9C0C7 1298 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 ADAM19Q9H013 955 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 SLC17A5Q9NRA2 495 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 RLIMQ9NVW2 624 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 ADPRHL2Q9NX46 363 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 THUMPD1Q9NXG2 353 aaKnown RBP9.87□□□□□ -0.83
DUBR-204ENST00000490441 NKIRAS1Q9NYS0 192 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 ADAM21Q9UKJ8 722 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 ZNF232Q9UNY5 417 aa9.87□□□□□ -0.83
DUBR-204ENST00000490441 IGHV4-30-2A0A087WSY4 118 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 A0A096LPI6 279 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 AQP7P3A6NL99 342 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 A8MVM7 634 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 TMEM229AB2RXF0 380 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 LILRA1O75019 489 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 SNNO75324 88 aaPredicted RBP9.86□□□□□ -0.83
DUBR-204ENST00000490441 AKR7A3O95154 331 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 IFNA2P01563 188 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 ETFAP13804 333 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 CDH2P19022 906 aaPredicted RBP9.86□□□□□ -0.83
DUBR-204ENST00000490441 WDR4P57081 412 aaKnown RBP9.86□□□□□ -0.83
DUBR-204ENST00000490441 RNF220Q5VTB9 566 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 C11orf71Q6IPW1 123 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 B3GLCTQ6Y288 498 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 MSANTD1Q6ZTZ1 278 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 VRK2Q86Y07 508 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 TMEM99Q8N816 258 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 WDR31Q8NA23 367 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 KCNS3Q9BQ31 491 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 PIF1Q9H611 641 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 TPT1P8Q9HAU6 139 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 ZIM2Q9NZV7 527 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 RAB21Q9UL25 225 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 ZNF443Q9Y2A4 671 aaPredicted RBP9.86□□□□□ -0.83
DUBR-204ENST00000490441 PMF1-BGLAPU3KQ54 211 aa9.86□□□□□ -0.83
DUBR-204ENST00000490441 DSPPQ9NZW4 1301 aa9.85□□□□□ -0.83
DUBR-204ENST00000490441 ANK3Q12955 4377 aaKnown RBP9.85□□□□□ -0.83
DUBR-204ENST00000490441 A8MV72 311 aaPredicted RBP9.85□□□□□ -0.83
DUBR-204ENST00000490441 ZNF587BE7ETH6 402 aa9.85□□□□□ -0.83
DUBR-204ENST00000490441 H7C417 338 aa9.85□□□□□ -0.83
DUBR-204ENST00000490441 UBDO15205 165 aa9.85□□□□□ -0.83
DUBR-204ENST00000490441 VAMP5O95183 116 aa9.85□□□□□ -0.83
DUBR-204ENST00000490441 AHSA1O95433 338 aa9.85□□□□□ -0.83
DUBR-204ENST00000490441 CSF3P09919 207 aa9.85□□□□□ -0.83
DUBR-204ENST00000490441 ZCCHC18P0CG32 403 aa9.85□□□□□ -0.83
DUBR-204ENST00000490441 SLC25A16P16260 332 aa9.85□□□□□ -0.83
DUBR-204ENST00000490441 GTF2E2P29084 291 aaKnown RBP9.85□□□□□ -0.83
DUBR-204ENST00000490441 APOBEC3AP31941 199 aaPredicted RBP9.85□□□□□ -0.83
DUBR-204ENST00000490441 BNIP2Q12982 314 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms