RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 NR2C2APQ86WQ0 139 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 NRSN1Q8IZ57 195 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 STPG2Q8N412 459 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CPXM2Q8N436 756 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SLC44A3Q8N4M1 653 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 NFKBIDQ8NI38 313 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ZNF461Q8TAF7 563 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SCARB1Q8WTV0 552 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 MRPS31Q92665 395 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ATOH1Q92858 354 aaPredicted RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 PHF21AQ96BD5 680 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 OTULINQ96BN8 352 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 MTFMTQ96DP5 389 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 MTERF3Q96E29 417 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 WDR34Q96EX3 536 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 OTUB1Q96FW1 271 aaPredicted RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 LRR1Q96L50 414 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 FOPNLQ96NB1 174 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ERMAPQ96PL5 475 aaPredicted RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 TEFMQ96QE5 360 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 OR2A7Q96R45 310 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 GFM1Q96RP9 751 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 IL4I1Q96RQ9 567 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SECISBP2Q96T21 854 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 EGFL8Q99944 293 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 THAP7Q9BT49 309 aaPredicted RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 WACQ9BTA9 647 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 H2AFJQ9BTM1 129 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 WRAP53Q9BUR4 548 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 DPCDQ9BVM2 203 aaPredicted RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SPATA5L1Q9BVQ7 753 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CINPQ9BW66 212 aaPredicted RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SORBS1Q9BX66 1292 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CIPCQ9C0C6 399 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 DNTTIP1Q9H147 329 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ABCG5Q9H222 651 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 FN3KQ9H479 309 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ZDHHC6Q9H6R6 413 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 GAREM1Q9H706 876 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SFXN1Q9H9B4 322 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 BPIFA1Q9NP55 256 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SARS2Q9NP81 518 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 MYNNQ9NPC7 610 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ZC4H2Q9NQZ6 224 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 IMP3Q9NV31 184 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 NUDT15Q9NV35 164 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 COA4Q9NYJ1 87 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 RDH8Q9NYR8 311 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 PIPOXQ9P0Z9 390 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 VPS29Q9UBQ0 182 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 EPHA6Q9UF33 1036 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SERGEFQ9UGK8 458 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 NDRG3Q9UGV2 375 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CD84Q9UIB8 345 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 PURGQ9UJV8 347 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 COPS3Q9UNS2 423 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 ICKQ9UPZ9 632 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 EXOGQ9Y2C4 368 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 YARS2Q9Y2Z4 477 aaKnown RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 PRSS21Q9Y6M0 314 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 SESN1Q9Y6P5 492 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 XIRP2A4UGR9 3374 aa3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 COL27A1Q8IZC6 1860 aaPredicted RBP3.17□□□□□ -1.9
CRNKL1-203ENST00000490258 CPAMD8Q8IZJ3 1885 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 USP34Q70CQ2 3546 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ARPC4-TTLL3A0A0A6YYG9 625 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 CXorf51AA0A1B0GTR3 108 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 A0A1W2PRB8 838 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 NAP1L6A6NFF2 107 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ANKDD1BA6NHY2 528 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SHISA7A6NL88 538 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 HMSDA8MTL9 139 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 FAM171A2A8MVW0 826 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SNRPGP15A8MWD9 76 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 H0YC42 278 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 J3KTA2 159 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 FOXE1O00358 373 aaPredicted RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 KPNA3O00505 521 aaPredicted RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 CASKO14936 926 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 MBTPS2O43462 519 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 TSC22D2O75157 780 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 MTX2O75431 263 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 CLDN11O75508 207 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 AQP8O94778 261 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 RGS11O94810 467 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 UBL3O95164 117 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 LRATO95237 230 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SLC25A14O95258 325 aaPredicted RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 GUCA1CO95843 209 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 OLFM2O95897 454 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 IL5P05113 134 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 RPLP2P05387 115 aaKnown RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 EIF4EP06730 217 aaKnown RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 PROS1P07225 676 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 H1F0P07305 194 aaKnown RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 HIST1H2AGP0C0S8 130 aaPredicted RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 OR12D1P0DN82 309 aa3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 SAGP10523 405 aaPredicted RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 ZNF8P17098 575 aaPredicted RBP3.16□□□□□ -1.9
CRNKL1-203ENST00000490258 CXCL2P19875 107 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms