RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 TAS2R16Q9NYV7 291 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 FLVCR1Q9Y5Y0 555 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 SLC25A15Q9Y619 301 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 VPS13CQ709C8 3753 aa8.56□□□□□ -1.04
TMEM39A-210ENST00000490099 TRIM64A6NGJ6 449 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 TRIM64BA6NI03 449 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 TMEM229AB2RXF0 380 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 FTCDNL1E5RQL4 147 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 MRPL33O75394 65 aaKnown RBP8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 ITGA5P08648 1049 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 GKN3PP0CG01 181 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 UQCRBP14927 111 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 ETS2P15036 469 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 ADSLP30566 484 aaPredicted RBP8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 CRATP43155 626 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 FOXG1P55316 489 aaPredicted RBP8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 OR2B6P58173 313 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 RPS4XP62701 263 aaKnown RBP8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 IRX1P78414 480 aaPredicted RBP8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 GUCY1A3Q02108 690 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 PPA1Q15181 289 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 ETFDHQ16134 617 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 OR7E24Q6IFN5 339 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 SLC2A7Q6PXP3 512 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 C6orf89Q6UWU4 347 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 CLEC9AQ6UXN8 241 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 C10orf111Q8N326 155 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 C1orf162Q8NEQ5 155 aaPredicted RBP8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 NEUROG1Q92886 237 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 FBXW5Q969U6 566 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 DDIT4LQ96D03 193 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 MUCL1Q96DR8 90 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 TMEM19Q96HH6 336 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 NAA11Q9BSU3 229 aaPredicted RBP8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 NSRP1Q9H0G5 558 aaKnown RBP8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 TCF7L2Q9NQB0 619 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 SLC7A10Q9NS82 523 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 ASB6Q9NWX5 421 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 SLAMF8Q9P0V8 285 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 DCTN4Q9UJW0 460 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 ADAM21Q9UKJ8 722 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 ZNF232Q9UNY5 417 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 LAMP3Q9UQV4 416 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 ZNF443Q9Y2A4 671 aaPredicted RBP8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 SLC9A8Q9Y2E8 581 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 IFT52Q9Y366 437 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 ABCA1O95477 2261 aa8.55□□□□□ -1.04
TMEM39A-210ENST00000490099 LOC102725191A0A1B0GVB3 256 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 AQP7P3A6NL99 342 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 A8MVM7 634 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 IGHV3-9P01782 118 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 BCHEP06276 602 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 GPIP06744 558 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 GPX2P18283 190 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 CCNA2P20248 432 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 PTAFRP25105 342 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 IDUAP35475 653 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 ATP4BP51164 291 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 ATP5J2P56134 94 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 GNGT1P63211 74 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 EGR4Q05215 589 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 CEACAM7Q14002 265 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 LARS2Q15031 903 aaKnown RBP8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 ADRM1Q16186 407 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 C6orf10Q5SRN2 563 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 TSPO2Q5TGU0 170 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 DLEU7Q6UYE1 221 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 SERPINA11Q86U17 422 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 LSRQ86X29 649 aaPredicted RBP8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 C17orf78Q8N4C9 275 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 TMEM99Q8N816 258 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 LSMEM1Q8N8F7 131 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 KBTBD8Q8NFY9 601 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 STK35Q8TDR2 534 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 C3orf49Q96BT1 292 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 EBF4Q9BQW3 602 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 TRAF4Q9BUZ4 470 aaPredicted RBP8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 RAD21L1Q9H4I0 556 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 C12orf10Q9HB07 376 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 MGAT4BQ9UQ53 548 aa8.54□□□□□ -1.04
TMEM39A-210ENST00000490099 E7EQL1 145 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 CLOCKO15516 846 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 AKR7A3O95154 331 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 VAMP5O95183 116 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 ANP32DO95626 131 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 ARAFP10398 606 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 CXCR1P25024 350 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 CD40P25942 277 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 MPGP29372 298 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 PRKAR1BP31321 381 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 LSP1P33241 339 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 GYS2P54840 703 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 KRTAP1-1Q07627 177 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 FAPQ12884 760 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 RPS26P11Q5JNZ5 115 aaPredicted RBP8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 PAGE3Q5JUK9 113 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 OTUD3Q5T2D3 398 aaPredicted RBP8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 C11orf71Q6IPW1 123 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 ALKBH2Q6NS38 261 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms