RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 NUDT7P0C024 238 aa17.01■□□□□ 0.31
TNFRSF1B-202ENST00000489921 CXCR1P25024 350 aa17.01■□□□□ 0.31
TNFRSF1B-202ENST00000489921 CRISP3P54108 245 aa17.01■□□□□ 0.31
TNFRSF1B-202ENST00000489921 OR7A5Q15622 319 aa17.01■□□□□ 0.31
TNFRSF1B-202ENST00000489921 BEND6Q5SZJ8 279 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1B-202ENST00000489921 RNF220Q5VTB9 566 aa17.01■□□□□ 0.31
TNFRSF1B-202ENST00000489921 OR9K2Q8NGE7 335 aa17.01■□□□□ 0.31
TNFRSF1B-202ENST00000489921 BOD1Q96IK1 185 aa17.01■□□□□ 0.31
TNFRSF1B-202ENST00000489921 ITCHQ96J02 903 aa17.01■□□□□ 0.31
TNFRSF1B-202ENST00000489921 DHRS9Q9BPW9 319 aa17.01■□□□□ 0.31
TNFRSF1B-202ENST00000489921 CALML5Q9NZT1 146 aa17.01■□□□□ 0.31
TNFRSF1B-202ENST00000489921 A0A096LNT2 108 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 M0R1B8 84 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 CRLF1O75462 422 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 GPIP06744 558 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 UQCRBP14927 111 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 PPP2R2BQ00005 443 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 AGAP6Q5VW22 663 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 WBP2NLQ6ICG8 309 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 SLC22A25Q6T423 547 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 KLHL17Q6TDP4 642 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 EPGNQ6UW88 154 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 SERPINA11Q86U17 422 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 CADM2Q8N3J6 435 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 C1orf162Q8NEQ5 155 aaPredicted RBP17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 C3orf49Q96BT1 292 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 SF3B5Q9BWJ5 86 aaKnown RBP17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 SPATA9Q9BWV2 254 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 CACNG6Q9BXT2 260 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 ALG2Q9H553 416 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 CBLN4Q9NTU7 201 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 FAIMQ9NVQ4 179 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 UPB1Q9UBR1 384 aa17■□□□□ 0.31
TNFRSF1B-202ENST00000489921 A0A0G2JPF8 293 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 A8MVM7 634 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 TMEM229AB2RXF0 380 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 HNRNPCL2B2RXH8 293 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 HNRNPCL3B7ZW38 293 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 HNRNPCL1O60812 293 aaKnown RBP16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 ANP32DO95626 131 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 HNRNPCL4P0DMR1 293 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 BMP2P12643 396 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 MPGP29372 298 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 LGALS3BPQ08380 585 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 RGNQ15493 299 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 SLC2A7Q6PXP3 512 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 FUNDC1Q8IVP5 155 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 MSRB3Q8IXL7 192 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 C17orf78Q8N4C9 275 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 OR10H5Q8NGA6 315 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 MAL2Q969L2 176 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 PIF1Q9H611 641 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 RMND5AQ9H871 391 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 BCL2L10Q9HD36 194 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 SLC52A3Q9NQ40 469 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 NKIRAS1Q9NYS0 192 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 USH1CQ9Y6N9 552 aa16.99■□□□□ 0.31
TNFRSF1B-202ENST00000489921 IGHV4-30-2A0A087WSY4 118 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 FAM234BA2RU67 622 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 FRS3O43559 492 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 SSX4O60224 188 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 MRPL19P49406 292 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 HOXC5Q00444 222 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 EGR4Q05215 589 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 C1orf140Q5VVS0 124 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 CREB3L2Q70SY1 520 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 LINGO2Q7L985 606 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 AAED1Q7RTV5 226 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 EPHX4Q8IUS5 362 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 C10orf111Q8N326 155 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 MIER2Q8N344 545 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 MUC15Q8N387 334 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 HS6ST2Q96MM7 605 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 PTDSS2Q9BVG9 487 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 BARX1Q9HBU1 254 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 A4GALTQ9NPC4 353 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 SLC25A37Q9NYZ2 338 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 SLAMF8Q9P0V8 285 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 ARFGEF3Q5TH69 2177 aa16.98■□□□□ 0.31
TNFRSF1B-202ENST00000489921 FTCDNL1E5RQL4 147 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 CLIC1O00299 241 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 FABP6P51161 128 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 DMTNQ08495 405 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 LARS2Q15031 903 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 NRF1Q16656 503 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 ZSWIM7Q19AV6 140 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 HIKESHIQ53FT3 197 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 C6orf10Q5SRN2 563 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 GPAT4Q86UL3 456 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 COMTD1Q86VU5 262 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 HTRA1Q92743 480 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 ADPRHL2Q9NX46 363 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 THUMPD1Q9NXG2 353 aaKnown RBP16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 POU2F3Q9UKI9 436 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 ZNF232Q9UNY5 417 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 AMDHD2Q9Y303 409 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 IFT52Q9Y366 437 aa16.97■□□□□ 0.31
TNFRSF1B-202ENST00000489921 GPRIN2O60269 458 aa16.96■□□□□ 0.31
TNFRSF1B-202ENST00000489921 FZD7O75084 574 aa16.96■□□□□ 0.31
TNFRSF1B-202ENST00000489921 SELENOPP49908 381 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms