RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 GOLGA8NF8WBI6 632 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 ZNF195O14628 629 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 LSM1O15116 133 aaKnown RBP5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 RGS14O43566 566 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 GMFGO60234 142 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 GLRA3O75311 464 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 SYNGR4O95473 234 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 HSPA4LO95757 839 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 PLGP00747 810 aaPredicted RBP5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 TUBBP07437 444 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 YES1P07947 543 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 FGF4P08620 206 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 BCKDHAP12694 445 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 CPA3P15088 417 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 ELK4P28324 431 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 EIF1P41567 113 aaKnown RBP5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 RFX3P48380 749 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 PRIM2P49643 509 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 PRKAG1P54619 331 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 ATP5J2P56134 94 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 PPP2R2BQ00005 443 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 HABP2Q14520 560 aaPredicted RBP5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 RNPS1Q15287 305 aaKnown RBP5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 TAB1Q15750 504 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 ETFDHQ16134 617 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 ZNF239Q16600 458 aaKnown RBP5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 PGGHGQ32M88 737 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 PGS1Q32NB8 556 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 CCDC153Q494R4 210 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 ZNF672Q499Z4 452 aaPredicted RBP5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 PDSS1Q5T2R2 415 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 CLEC6AQ6EIG7 209 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 HEPHL1Q6MZM0 1159 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 ANKRD26P1Q6NSI1 321 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 CBLN3Q6UW01 205 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 MTERF4Q7Z6M4 381 aaKnown RBP5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 FAM90A1Q86YD7 464 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 TDRPQ86YL5 185 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 TUSC5Q8IXB3 177 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 GATSQ8NAP1 163 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 B4GALNT2Q8NHY0 566 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 CDC26Q8NHZ8 85 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 GPR119Q8TDV5 335 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 ABHD3Q8WU67 409 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 ROBO4Q8WZ75 1007 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 ZNF75CPQ92670 426 aaPredicted RBP5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 CPNE4Q96A23 557 aaPredicted RBP5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 S100PBPQ96BU1 408 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 MTERF3Q96E29 417 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 FAM120BQ96EK7 910 aaKnown RBP5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 KLHL15Q96M94 604 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 C16orf45Q96MC5 204 aaPredicted RBP5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 MS4A4EQ96PG1 132 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 STACQ99469 402 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 SRXN1Q9BYN0 137 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 PRRG4Q9BZD6 226 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 TRIM2Q9C040 744 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 TINAGL1Q9GZM7 467 aaPredicted RBP5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 IQCGQ9H095 443 aaKnown RBP5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 KLK15Q9H2R5 256 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 PIGUQ9H490 435 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 COQ10BQ9H8M1 238 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 LRTM1Q9HBL6 345 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 GPR35Q9HC97 309 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 FANCFQ9NPI8 374 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 EQTNQ9NQ60 294 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 ASB6Q9NWX5 421 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 SH3BP4Q9P0V3 963 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 ICAM5Q9UMF0 924 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 LAMP3Q9UQV4 416 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 TMED5Q9Y3A6 229 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 DNAJC15Q9Y5T4 150 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 RTTNQ86VV8 2226 aa5.62□□□□□ -1.51
PRPF40A-210ENST00000489741 A0A096LNT2 108 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 AZIN1O14977 448 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 AKAP10O43572 662 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 TRIAP1O43715 76 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 PGM3O95394 542 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 ADAP00813 363 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 IGLV2-14P01704 120 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 SHBGP04278 402 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 HMGN2P05204 90 aaKnown RBP5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 ALOX5P09917 674 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 LINC00032P0C843 101 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 PABPC4LP0CB38 370 aaKnown RBP5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 LAMP1P11279 417 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 NEFHP12036 1026 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 ME2P23368 584 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 CCT5P48643 541 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 ZNF41P51814 821 aaPredicted RBP5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 MAP2K6P52564 334 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 SUMO3P55854 103 aaPredicted RBP5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 C21orf58P58505 322 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 RPS4XP62701 263 aaKnown RBP5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 ZNF117Q03924 483 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 FOXF1Q12946 379 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 ITGADQ13349 1161 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 P2RY6Q15077 328 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 TSC22D1Q15714 1073 aa5.61□□□□□ -1.51
PRPF40A-210ENST00000489741 TOMM34Q15785 309 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms