RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 RBM18Q96H35 190 aaKnown RBP11.62□□□□□ -0.55
CLIC4-202ENST00000488683 MOGAT1Q96PD6 335 aa11.62□□□□□ -0.55
CLIC4-202ENST00000488683 FBRSQ9HAH7 460 aa11.62□□□□□ -0.55
CLIC4-202ENST00000488683 SLC23A1Q9UHI7 598 aa11.62□□□□□ -0.55
CLIC4-202ENST00000488683 OR10H1Q9Y4A9 318 aa11.62□□□□□ -0.55
CLIC4-202ENST00000488683 FOXS1O43638 330 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 WNT1P04628 370 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 SLC35E2P0CK97 266 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 MYF5P13349 255 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 TALDO1P37837 337 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 NKAIN2Q5VXU1 208 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 TCTE3Q8IZS6 198 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 OR11H4Q8NGC9 324 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 LGALS14Q8TCE9 139 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.61□□□□□ -0.55
CLIC4-202ENST00000488683 Q96M85 177 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 RTN4RQ9BZR6 473 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 KCNK15Q9H427 330 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 SRA1Q9HD15 236 aaKnown RBP11.61□□□□□ -0.55
CLIC4-202ENST00000488683 INPP5EQ9NRR6 644 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 CHRNA9Q9UGM1 479 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 CD207Q9UJ71 328 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 KLHDC2Q9Y2U9 406 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 ZNF780AO75290 641 aaPredicted RBP11.61□□□□□ -0.55
CLIC4-202ENST00000488683 AK1P00568 194 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 IGHV4-34P06331 123 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 AHCYP23526 432 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 SLC6A1P30531 599 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 AQP2P41181 271 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 RPS11P62280 158 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLIC4-202ENST00000488683 CD226Q15762 336 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 CEP78Q5JTW2 689 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 RTL4Q6ZR62 310 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 PRR23CQ6ZRP0 262 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 GPALPP1Q8IXQ4 340 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 OR51Q1Q8NH59 317 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 C16orf52Q8NHV5 167 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 MMABQ96EY8 250 aaPredicted RBP11.61□□□□□ -0.55
CLIC4-202ENST00000488683 WDR89Q96FK6 387 aaPredicted RBP11.61□□□□□ -0.55
CLIC4-202ENST00000488683 HSPA12BQ96MM6 686 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 GFI1Q99684 422 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 ULBP3Q9BZM4 244 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 NOX4Q9NPH5 578 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 CACNG2Q9Y698 323 aa11.61□□□□□ -0.55
CLIC4-202ENST00000488683 TEX13CA0A0J9YWL9 993 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 SDC3O75056 442 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 CSTAP01040 98 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 CTSEP14091 401 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 POU3F3P20264 500 aaPredicted RBP11.6□□□□□ -0.55
CLIC4-202ENST00000488683 NPR2P20594 1047 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 AKT2P31751 481 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 GZMKP49863 264 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 GFERP55789 205 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 HTR4Q13639 388 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 ZSWIM7Q19AV6 140 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 LINC00114Q6XXX2 140 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 ZNF655Q8N720 491 aaPredicted RBP11.6□□□□□ -0.55
CLIC4-202ENST00000488683 VSTM2LQ96N03 204 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 MESP1Q9BRJ9 268 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 LMF2Q9BU23 707 aaKnown RBP11.6□□□□□ -0.55
CLIC4-202ENST00000488683 LMAN2LQ9H0V9 348 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 IRF2BPLQ9H1B7 796 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 C14orf105Q9NVL8 296 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 RPS6KB2Q9UBS0 482 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 CLDN16Q9Y5I7 305 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 ENTPD2Q9Y5L3 495 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 OR5K3A6NET4 321 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 PIN1P1O15428 100 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 ORC5O43913 435 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 SLC43A1O75387 559 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 OR2B3O76000 313 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 SEMA4FO95754 770 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 THEGLP0DJG4 465 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 TMIGD3P0DMS9 266 aaPredicted RBP11.6□□□□□ -0.55
CLIC4-202ENST00000488683 OR8G3PP0DMU2 310 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 CT45A8P0DMV1 189 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 CT45A9P0DMV2 189 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 CDKN2AP42771 156 aaKnown RBP11.6□□□□□ -0.55
CLIC4-202ENST00000488683 PLA1AQ53H76 456 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 CT45A2Q5DJT8 189 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 APOOLQ6UXV4 268 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 GRAMD2AQ8IUY3 354 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 SLC35F2Q8IXU6 374 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 ZNF671Q8TAW3 534 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 TOE1Q96GM8 510 aaKnown RBP11.6□□□□□ -0.55
CLIC4-202ENST00000488683 GAL3ST1Q99999 423 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 SEMA4CQ9C0C4 833 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 ANKRD10Q9NXR5 420 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 HAO2Q9NYQ3 351 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 KLHL21Q9UJP4 597 aa11.6□□□□□ -0.55
CLIC4-202ENST00000488683 KHNYNO15037 678 aaKnown RBP11.59□□□□□ -0.55
CLIC4-202ENST00000488683 GMDSO60547 372 aa11.59□□□□□ -0.55
CLIC4-202ENST00000488683 TNFP01375 233 aa11.59□□□□□ -0.55
CLIC4-202ENST00000488683 RBMS1P29558 406 aaKnown RBP11.59□□□□□ -0.55
CLIC4-202ENST00000488683 SLC6A6P31641 620 aa11.59□□□□□ -0.55
CLIC4-202ENST00000488683 YPEL5P62699 121 aa11.59□□□□□ -0.55
CLIC4-202ENST00000488683 LEG1Q6P5S2 330 aa11.59□□□□□ -0.55
CLIC4-202ENST00000488683 LSMEM1Q8N8F7 131 aa11.59□□□□□ -0.55
CLIC4-202ENST00000488683 OR10AC1Q8NH08 325 aa11.59□□□□□ -0.55
CLIC4-202ENST00000488683 AKAP1Q92667 903 aaKnown RBP eCLIP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms