RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 RAB34Q9BZG1 259 aa2.17□□□□□ -2.06
CD46-215ENST00000488596 ACTR6Q9GZN1 396 aa2.17□□□□□ -2.06
CD46-215ENST00000488596 RBKSQ9H477 322 aa2.17□□□□□ -2.06
CD46-215ENST00000488596 NXF3Q9H4D5 531 aaKnown RBP2.17□□□□□ -2.06
CD46-215ENST00000488596 NANOGQ9H9S0 305 aa2.17□□□□□ -2.06
CD46-215ENST00000488596 DAZ3Q9NR90 486 aaKnown RBP2.17□□□□□ -2.06
CD46-215ENST00000488596 MTRF1LQ9UGC7 380 aaKnown RBP2.17□□□□□ -2.06
CD46-215ENST00000488596 CDH9Q9ULB4 789 aa2.17□□□□□ -2.06
CD46-215ENST00000488596 COPS3Q9UNS2 423 aa2.17□□□□□ -2.06
CD46-215ENST00000488596 CDH10Q9Y6N8 788 aa2.17□□□□□ -2.06
CD46-215ENST00000488596 ATAD2BQ9ULI0 1458 aa2.17□□□□□ -2.06
CD46-215ENST00000488596 SH3TC1Q8TE82 1336 aa2.17□□□□□ -2.06
CD46-215ENST00000488596 IGHV1OR21-1A0A087WYE8 117 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 IGKV6D-21A0A0A0MT36 114 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 NPIPB7O75200 414 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 TNFSF13O75888 250 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 SCGNO76038 276 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 CCR1P32246 355 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 RFC4P35249 363 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 GRIA1P42261 906 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 MAGEA8P43361 318 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 VDAC2P45880 294 aaPredicted RBP2.16□□□□□ -2.06
CD46-215ENST00000488596 GPM6AP51674 278 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 ZNF133P52736 654 aaPredicted RBP2.16□□□□□ -2.06
CD46-215ENST00000488596 EFNB2P52799 333 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 ACTR1AP61163 376 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 CHIT1Q13231 466 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 UNC119Q13432 240 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 GPM6BQ13491 265 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 RIPK1Q13546 671 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 EXOC3L2Q2M3D2 409 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 SAMD4BQ5PRF9 694 aaKnown RBP2.16□□□□□ -2.06
CD46-215ENST00000488596 C1orf100Q5SVJ3 147 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 OR52E8Q6IFG1 317 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 C11orf71Q6IPW1 123 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 ZNF530Q6P9A1 599 aaPredicted RBP2.16□□□□□ -2.06
CD46-215ENST00000488596 UQCC3Q6UW78 93 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 IGFL2Q6UWQ7 119 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 HSDL2Q6YN16 418 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 Q6ZN92 141 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 RNF165Q6ZSG1 346 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 RFLNAQ6ZTI6 216 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 PGAP1Q75T13 922 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 GDPD3Q7L5L3 318 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 NLRP9Q7RTR0 991 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 PRSS41Q7RTY9 318 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 DHDDSQ86SQ9 333 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 RALGPS2Q86X27 583 aaPredicted RBP2.16□□□□□ -2.06
CD46-215ENST00000488596 ECHDC2Q86YB7 292 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 RDH10Q8IZV5 341 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 NKAPP1Q8N9T2 125 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 SUMF2Q8NBJ7 301 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 NEIL3Q8TAT5 605 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 FBXO30Q8TB52 745 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 DNAJA4Q8WW22 397 aaPredicted RBP2.16□□□□□ -2.06
CD46-215ENST00000488596 UCN3Q969E3 161 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 MYDGFQ969H8 173 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 KCNA7Q96RP8 456 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 HIST1H4GQ99525 98 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 CRACR2AQ9BSW2 395 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 SELENOIQ9C0D9 397 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 C20orf85Q9H1P6 137 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 YY1AP1Q9H869 796 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 SLC25A22Q9H936 323 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 SEC14L3Q9UDX4 400 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 ASF1AQ9Y294 204 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 CACNG2Q9Y698 323 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 DDX49Q9Y6V7 483 aaKnown RBP2.16□□□□□ -2.06
CD46-215ENST00000488596 CDC42BPBQ9Y5S2 1711 aa2.16□□□□□ -2.06
CD46-215ENST00000488596 KIR2DL5BA0A0G2JN68 375 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 KIR2DL5BA0A0G2JPC4 375 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 IQANK1A0A1B0GTG1 560 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 GJE1A6NN92 205 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 A8MXQ7 604 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 MED7O43513 233 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 HCRTR1O43613 425 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 FAM189A1O60320 539 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 RAMP3O60896 148 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 SURF6O75683 361 aaKnown RBP2.15□□□□□ -2.07
CD46-215ENST00000488596 KLF8O95600 359 aaPredicted RBP2.15□□□□□ -2.07
CD46-215ENST00000488596 KLK3P07288 261 aaPredicted RBP2.15□□□□□ -2.07
CD46-215ENST00000488596 GIPP09681 153 aaPredicted RBP2.15□□□□□ -2.07
CD46-215ENST00000488596 POU2F1P14859 743 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 ZNF17P17021 662 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 NUDT1P36639 197 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 KIR2DS4P43632 304 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 CCT3P49368 545 aaKnown RBP2.15□□□□□ -2.07
CD46-215ENST00000488596 DUSP3P51452 185 aaPredicted RBP2.15□□□□□ -2.07
CD46-215ENST00000488596 KPNA2P52292 529 aaKnown RBP2.15□□□□□ -2.07
CD46-215ENST00000488596 ATP1B3P54709 279 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 IL24Q13007 206 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 NRF1Q16656 503 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 PARP15Q460N3 678 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 MARCH8Q5T0T0 291 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 CASC1Q6TDU7 716 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 Q6ZVH6 145 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 KIR2DL5AQ8N109 375 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 ZCCHC7Q8N3Z6 543 aaKnown RBP2.15□□□□□ -2.07
CD46-215ENST00000488596 OR51S1Q8NGJ8 323 aa2.15□□□□□ -2.07
CD46-215ENST00000488596 OR9G1Q8NH87 305 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms