RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 BRIX1Q8TDN6 353 aaKnown RBP11.1□□□□□ -0.63
HDAC6-230ENST00000488543 GATAD2BQ8WXI9 593 aa11.1□□□□□ -0.63
HDAC6-230ENST00000488543 SAMD8Q96LT4 415 aa11.1□□□□□ -0.63
HDAC6-230ENST00000488543 HS6ST2Q96MM7 605 aa11.1□□□□□ -0.63
HDAC6-230ENST00000488543 AGAP4Q96P64 663 aa11.1□□□□□ -0.63
HDAC6-230ENST00000488543 DCLRE1CQ96SD1 692 aaKnown RBP11.1□□□□□ -0.63
HDAC6-230ENST00000488543 KLHDC3Q9BQ90 382 aa11.1□□□□□ -0.63
HDAC6-230ENST00000488543 MIXL1Q9H2W2 232 aa11.1□□□□□ -0.63
HDAC6-230ENST00000488543 KRCC1Q9NPI7 259 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-230ENST00000488543 MYL12BO14950 172 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 NCR1O76036 304 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 APOA1P02647 267 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 TCN2P20062 427 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 GNALP38405 381 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 DEFA1P59665 94 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 DEFA3P59666 94 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 SNAPC1Q16533 368 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 PGGHGQ32M88 737 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 SLC30A6Q6NXT4 461 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 ULK3Q6PHR2 472 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 PAPD4Q6PIY7 484 aaKnown RBP11.09□□□□□ -0.63
HDAC6-230ENST00000488543 TMEM205Q6UW68 189 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 C6orf15Q6UXA7 325 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-230ENST00000488543 TMPRSS11AQ6ZMR5 421 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 NANOGP1Q8N7R0 232 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 ZNF527Q8NB42 609 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 C17orf47Q8NEP4 570 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 TMEM163Q8TC26 289 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 TM9SF4Q92544 642 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 ZNF524Q96C55 264 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 BPIFA2Q96DR5 249 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 OMA1Q96E52 524 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 ZNF582Q96NG8 517 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-230ENST00000488543 PRRG3Q9BZD7 231 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 ENKD1Q9H0I2 346 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 EXOSC3Q9NQT5 275 aaKnown RBP11.09□□□□□ -0.63
HDAC6-230ENST00000488543 PLSCR3Q9NRY6 295 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 MRTO4Q9UKD2 239 aaKnown RBP11.09□□□□□ -0.63
HDAC6-230ENST00000488543 TMEM5Q9Y2B1 443 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 N6AMT1Q9Y5N5 214 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 SCDO00767 359 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 DVL2O14641 736 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 UBL4AP11441 157 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 IL7P13232 177 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 ABCD3P28288 659 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 SDC2P34741 201 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 NOVA1P51513 510 aaKnown RBP11.09□□□□□ -0.63
HDAC6-230ENST00000488543 RNF4P78317 190 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 PSPHP78330 225 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 PLCXD2Q0VAA5 305 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 ARMC4Q5T2S8 1044 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 CBLN3Q6UW01 205 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 FAM131AQ6UXB0 335 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 B3GLCTQ6Y288 498 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 CPEB2Q7Z5Q1 589 aaKnown RBP11.09□□□□□ -0.63
HDAC6-230ENST00000488543 NLGN4YQ8NFZ3 816 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-230ENST00000488543 OR13C2Q8NGS9 318 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 PHOSPHO1Q8TCT1 267 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 C3orf49Q96BT1 292 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 TTYH2Q9BSA4 534 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 DDA1Q9BW61 102 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 MND1Q9BWT6 205 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 WDR54Q9H977 334 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 TXNL4BQ9NX01 149 aaKnown RBP11.09□□□□□ -0.63
HDAC6-230ENST00000488543 ZMIZ1Q9ULJ6 1067 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 STUB1Q9UNE7 303 aa11.09□□□□□ -0.63
HDAC6-230ENST00000488543 C9J4A7 227 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 ADAM10O14672 748 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 SURF4O15260 269 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 F8A1P23610 371 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 PSMA1P25786 263 aaKnown RBP11.08□□□□□ -0.64
HDAC6-230ENST00000488543 ETV6P41212 452 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 HTR3AP46098 478 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 GAS1P54826 345 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 FHL1Q13642 323 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 TIMM50Q3ZCQ8 353 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 OR6F1Q8NGZ6 308 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 FANK1Q8TC84 345 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 OR52D1Q9H346 318 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 UBQLN3Q9H347 655 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 NDUFB11Q9NX14 153 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 ICAM5Q9UMF0 924 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 SIGLEC7Q9Y286 467 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 AKAP13Q12802 2813 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 C17orf51A8MQB3 221 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 KDM4EB2RXH2 506 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-230ENST00000488543 ZNF670-ZNF695F2Z2N8 137 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 ZNF264O43296 627 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 ZNF354AO60765 605 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-230ENST00000488543 PTP4A3O75365 173 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 CELA2AP08217 269 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 MST1P26927 711 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 IL12BP29460 328 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 RORCP51449 518 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 PNLIPRP2P54317 469 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 TOMM20Q15388 145 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 CCDC92Q53HC0 331 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-230ENST00000488543 MEDAGQ5VYS4 303 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 HSDL2Q6YN16 418 aa11.08□□□□□ -0.64
HDAC6-230ENST00000488543 THSD4Q6ZMP0 1018 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms