RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 PERPQ96FX8 193 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 ANKRD27Q96NW4 1050 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 ZNF607Q96SK3 696 aa15.65■□□□□ 0.1
ITGB1-215ENST00000488494 ESRP2Q9H6T0 727 aaKnown RBP15.65■□□□□ 0.1
ITGB1-215ENST00000488494 SETD2Q9BYW2 2564 aaPredicted RBP15.64■□□□□ 0.09
ITGB1-215ENST00000488494 A0A1B0GWA3 101 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 CIB4A0PJX0 185 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 OR5H1A6NKK0 313 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 NPIPB7O75200 414 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 CD3EP07766 207 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 ITGA5P08648 1049 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 BSPH1Q075Z2 132 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 TIMM23BQ5SRD1 257 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 NCMAPQ5T1S8 102 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 METTL21CQ5VZV1 264 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 CGB2Q6NT52 195 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 C6orf89Q6UWU4 347 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 C11orf65Q8NCR3 313 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 KBTBD8Q8NFY9 601 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 STK35Q8TDR2 534 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 TMEM45BQ96B21 275 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 MUCL1Q96DR8 90 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 PTDSS2Q9BVG9 487 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 TAS2R16Q9NYV7 291 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 NPAP1Q9NZP6 1156 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 TESQ9UGI8 421 aaKnown RBP15.64■□□□□ 0.09
ITGB1-215ENST00000488494 SLC13A4Q9UKG4 626 aa15.64■□□□□ 0.09
ITGB1-215ENST00000488494 SERPINB7O75635 380 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 GTF2E2P29084 291 aaKnown RBP15.63■□□□□ 0.09
ITGB1-215ENST00000488494 RPS5P46782 204 aaKnown RBP15.63■□□□□ 0.09
ITGB1-215ENST00000488494 P2RY4P51582 365 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 FOXG1P55316 489 aaPredicted RBP15.63■□□□□ 0.09
ITGB1-215ENST00000488494 RGS8P57771 180 aaPredicted RBP15.63■□□□□ 0.09
ITGB1-215ENST00000488494 EGR4Q05215 589 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 DMTNQ08495 405 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 C9orf135Q5VTT2 229 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 ADAM5Q6NVV9 412 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 P3H2Q8IVL5 708 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 LRRC75A-AS1Q8N1F1 130 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 LSMEM1Q8N8F7 131 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 ZIC4Q8N9L1 334 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 OR52N5Q8NH56 324 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 TSPEARQ8WU66 669 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 KTI12Q96EK9 354 aaPredicted RBP15.63■□□□□ 0.09
ITGB1-215ENST00000488494 ZNF385AQ96PM9 386 aaKnown RBP15.63■□□□□ 0.09
ITGB1-215ENST00000488494 SF3B5Q9BWJ5 86 aaKnown RBP15.63■□□□□ 0.09
ITGB1-215ENST00000488494 PRR14Q9BWN1 585 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 TRIM2Q9C040 744 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 DLL4Q9NR61 685 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 SLC7A10Q9NS82 523 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 PARPBPQ9NWS1 579 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 UPB1Q9UBR1 384 aa15.63■□□□□ 0.09
ITGB1-215ENST00000488494 PRR14LQ5THK1 2151 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 ACANP16112 2415 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 A0A1W2PR80 420 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 FTCDNL1E5RQL4 147 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 FBP2O00757 339 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 OPN1SWP03999 348 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 VIMP08670 466 aaKnown RBP15.62■□□□□ 0.09
ITGB1-215ENST00000488494 PCBP3P57721 371 aaKnown RBP15.62■□□□□ 0.09
ITGB1-215ENST00000488494 GUCY1A3Q02108 690 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 RBBP4Q09028 425 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 TRMT5Q32P41 509 aaKnown RBP15.62■□□□□ 0.09
ITGB1-215ENST00000488494 ALG10BQ5I7T1 473 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 TSPO2Q5TGU0 170 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 SHEQ5VZ18 495 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 TMEM225Q6GV28 225 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 AAED1Q7RTV5 226 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 NET1Q7Z628 596 aaPredicted RBP15.62■□□□□ 0.09
ITGB1-215ENST00000488494 P2RY8Q86VZ1 359 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 ZNF611Q8N823 705 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 SMYD1Q8NB12 490 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 LILRB1Q8NHL6 650 aaPredicted RBP15.62■□□□□ 0.09
ITGB1-215ENST00000488494 MFSD8Q8NHS3 518 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 TMEM171Q8WVE6 324 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 NEUROG1Q92886 237 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 SLC25A36Q96CQ1 311 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 SLCO5A1Q9H2Y9 848 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 KAT8Q9H7Z6 458 aaKnown RBP15.62■□□□□ 0.09
ITGB1-215ENST00000488494 C12orf10Q9HB07 376 aa15.62■□□□□ 0.09
ITGB1-215ENST00000488494 IGKV1D-42A0A075B6H8 117 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 DPRXA6NFQ7 191 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 M0R3H8 397 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 PDLIM1O00151 329 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 ARHGEF9O43307 516 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 MFN2O95140 757 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 PNMTP11086 282 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 PTNP21246 168 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 PCGF2P35227 344 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 PTH2RP49190 550 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 ARFIP2P53365 341 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 RIPPLY3P57055 190 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 HSP90B2PQ58FF3 399 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 SSX8Q7RTT4 187 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 RANBP3LQ86VV4 465 aaPredicted RBP15.61■□□□□ 0.09
ITGB1-215ENST00000488494 BHLHE22Q8NFJ8 381 aaPredicted RBP15.61■□□□□ 0.09
ITGB1-215ENST00000488494 RNF217Q8TC41 542 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 DNAJA4Q8WW22 397 aaPredicted RBP15.61■□□□□ 0.09
ITGB1-215ENST00000488494 IGFBPL1Q8WX77 278 aa15.61■□□□□ 0.09
ITGB1-215ENST00000488494 SLC38A4Q969I6 547 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms