RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 CLDN14O95500 239 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 HIST1H2ABP04908 130 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 RHCEP18577 417 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 CBLP22681 906 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 RBM34P42696 430 aaKnown RBP14.06□□□□□ -0.16
C9orf3-219ENST00000488186 SMIM11AP58511 58 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 IL1RL1Q01638 556 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 EGR4Q05215 589 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 MFSD13AQ14CX5 517 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 OTUD3Q5T2D3 398 aaPredicted RBP14.06□□□□□ -0.16
C9orf3-219ENST00000488186 FAM69AQ5T7M9 428 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 TMEM225Q6GV28 225 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 LINC00114Q6XXX2 140 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 HIST3H2AQ7L7L0 130 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 ZDHHC21Q8IVQ6 265 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 NKAIN4Q8IVV8 208 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 LILRB4Q8NHJ6 448 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 PIGXQ8TBF5 258 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 TMEM239Q8WW34 195 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 HIST1H2ACQ93077 130 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 TAAR8Q969N4 342 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 LRRC46Q96FV0 321 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 ZNF300Q96RE9 604 aaPredicted RBP14.06□□□□□ -0.16
C9orf3-219ENST00000488186 ZNF347Q96SE7 839 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 TACO1Q9BSH4 297 aaKnown RBP14.06□□□□□ -0.16
C9orf3-219ENST00000488186 SFXN3Q9BWM7 321 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 ASPNQ9BXN1 380 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 KLHL4Q9C0H6 718 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 KCNJ16Q9NPI9 418 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 A4GNTQ9UNA3 340 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 POMPQ9Y244 141 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 MED31Q9Y3C7 131 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 CACNA1CQ13936 2221 aa14.06□□□□□ -0.16
C9orf3-219ENST00000488186 IGKV1D-42A0A075B6H8 117 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 A0A1W2PNV4 684 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 AQP12BA6NM10 295 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 FAM90A27PA6NNH2 459 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 ACOT8O14734 319 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 SMAD9O15198 467 aaKnown RBP14.05□□□□□ -0.16
C9orf3-219ENST00000488186 CYTIPO60759 359 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 NPIPB7O75200 414 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 AKR7A3O95154 331 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 IL18BPO95998 194 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 THY1P04216 161 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 H1F0P07305 194 aaKnown RBP14.05□□□□□ -0.16
C9orf3-219ENST00000488186 UMPSP11172 480 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 VLDLRP98155 873 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 FOXF2Q12947 444 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 PAQR6Q6TCH4 344 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 ZNF730Q6ZMV8 503 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 FAM214BQ7L5A3 538 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 TSPYL5Q86VY4 417 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-219ENST00000488186 CCDC103Q8IW40 242 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 AQP12AQ8IXF9 295 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 CDK20Q8IZL9 346 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 OFCC1Q8IZS5 231 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 NAXEQ8NCW5 288 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 OR6S1Q8NH40 331 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 RNF128Q8TEB7 428 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 ABHD3Q8WU67 409 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 TMEM255BQ8WV15 326 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 C7orf34Q96L11 122 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 PIP5K1AQ99755 562 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 SLC19A3Q9BZV2 496 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 IL1RAPQ9NPH3 570 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 NDUFAF4Q9P032 175 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 EMC3Q9P0I2 261 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 KLHL13Q9P2N7 655 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 SLC7A8Q9UHI5 535 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 AURKCQ9UQB9 309 aa14.05□□□□□ -0.16
C9orf3-219ENST00000488186 TCRBV5S2A0A599 114 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 EEF1E1-BLOC1S5C9J1V9 151 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 EEF1E1O43324 174 aaKnown RBP14.04□□□□□ -0.16
C9orf3-219ENST00000488186 SMNDC1O75940 238 aaKnown RBP eCLIP14.04□□□□□ -0.16
C9orf3-219ENST00000488186 DIRAS1O95057 198 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 OR6A2O95222 327 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 LYPD3O95274 346 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 CH25HO95992 272 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 MT-ATP6P00846 226 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 YES1P07947 543 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 NQO1P15559 274 aaKnown RBP14.04□□□□□ -0.16
C9orf3-219ENST00000488186 SPIBQ01892 262 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 GABPB1Q06547 395 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-219ENST00000488186 SLC25A35Q3KQZ1 300 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 FGD3Q5JSP0 725 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 C1orf146Q5VVC0 180 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 WDR88Q6ZMY6 472 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 MAMDC2Q7Z304 686 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-219ENST00000488186 GPAT4Q86UL3 456 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 LSRQ86X29 649 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-219ENST00000488186 TUSC5Q8IXB3 177 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 TMEM99Q8N816 258 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 ZNF775Q96BV0 537 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-219ENST00000488186 RSRC1Q96IZ7 334 aaKnown RBP14.04□□□□□ -0.16
C9orf3-219ENST00000488186 PIGMQ9H3S5 423 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 MAGIXQ9H6Y5 334 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 NMNAT1Q9HAN9 279 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-219ENST00000488186 GP6Q9HCN6 339 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 PROCRQ9UNN8 238 aa14.04□□□□□ -0.16
C9orf3-219ENST00000488186 CORINQ9Y5Q5 1042 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms