RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 DHRS9Q9BPW9 319 aa4.47□□□□□ -1.69
R3HDM1-218ENST00000487294 MRPL57Q9BQC6 102 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-218ENST00000487294 TBL1XR1Q9BZK7 514 aa4.47□□□□□ -1.69
R3HDM1-218ENST00000487294 TRIM31Q9BZY9 425 aa4.47□□□□□ -1.69
R3HDM1-218ENST00000487294 SHARPINQ9H0F6 387 aa4.47□□□□□ -1.69
R3HDM1-218ENST00000487294 SMURF2Q9HAU4 748 aa4.47□□□□□ -1.69
R3HDM1-218ENST00000487294 TIGARQ9NQ88 270 aa4.47□□□□□ -1.69
R3HDM1-218ENST00000487294 CBLN4Q9NTU7 201 aa4.47□□□□□ -1.69
R3HDM1-218ENST00000487294 MED17Q9NVC6 651 aa4.47□□□□□ -1.69
R3HDM1-218ENST00000487294 CPSF2Q9P2I0 782 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-218ENST00000487294 CLEC4AQ9UMR7 237 aa4.47□□□□□ -1.69
R3HDM1-218ENST00000487294 MGAT4BQ9UQ53 548 aa4.47□□□□□ -1.69
R3HDM1-218ENST00000487294 A0A087WWL8 130 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 GNG14A0A1W2PPG7 69 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 OR5H1A6NKK0 313 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 GJE1A6NN92 205 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ZNF724A8MTY0 619 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 NDUFS8O00217 210 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 TNFSF11O14788 317 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 EFNA2O43921 213 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 SSX4O60224 188 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 TBX19O60806 448 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 RAMP1O60894 148 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 SMIM24O75264 130 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 OXSR1O95747 527 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ADAP00813 363 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 IGKV1D-16P01601 117 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 HNRNPCP07910 306 aaKnown RBP eCLIP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 IGHV4-31P0DP07 118 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 NDUFB7P17568 137 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 SRD5A1P18405 259 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 USF1P22415 310 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ME2P23368 584 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 IL32P24001 234 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 IGFBP5P24593 272 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ARL1P40616 181 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 FRKP42685 505 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 PAFAH1B1P43034 410 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 NUDT6P53370 316 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 SUMO3P55854 103 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 SLC18A2Q05940 514 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ACSM2AQ08AH3 577 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ZNF763Q0D2J5 394 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ZNF155Q12901 538 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 STX5Q13190 355 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 SQLEQ14534 574 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 PPA1Q15181 289 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ZNHIT3Q15649 155 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 GRAMD1BQ3KR37 738 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ZIK1Q3SY52 487 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 VPS26BQ4G0F5 336 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 GLE1Q53GS7 698 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 SGO1Q5FBB7 561 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ARL13AQ5H913 290 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 SLC25A53Q5H9E4 307 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 LGSNQ5TDP6 509 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 LIPNQ5VXI9 398 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ACSM2BQ68CK6 577 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 HBMQ6B0K9 141 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 FAM71E1Q6IPT2 247 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ZCCHC12Q6PEW1 402 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ZDHHC24Q6UX98 284 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 IKBIPQ70UQ0 350 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 BHLHA15Q7RTS1 189 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 NUFIP2Q7Z417 695 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 MTERF4Q7Z6M4 381 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 LCA5Q86VQ0 697 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 MEX3DQ86XN8 651 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 TUSC5Q8IXB3 177 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 RFLNBQ8N5W9 214 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 BANPQ8N9N5 519 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 CDRT4Q8N9R6 151 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 OR6Y1Q8NGX8 325 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 FBXO25Q8TCJ0 367 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ABHD3Q8WU67 409 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ZFAND2BQ8WV99 257 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 DPF1Q92782 380 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 EXOSC8Q96B26 276 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 APIPQ96GX9 242 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 RNF145Q96MT1 663 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 AMDHD1Q96NU7 426 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 BBS4Q96RK4 519 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 NPAS1Q99742 590 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 PSD2Q9BQI7 771 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 CACNG6Q9BXT2 260 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 ACPTQ9BZG2 426 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 GLIPR2Q9H4G4 154 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 COQ10BQ9H8M1 238 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 MYNNQ9NPC7 610 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 UBQLN4Q9NRR5 601 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 DDX18Q9NVP1 670 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 GIN1Q9NXP7 522 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 SENP1Q9P0U3 644 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 KLHL9Q9P2J3 617 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 VDAC3Q9Y277 283 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 STK38LQ9Y2H1 464 aa4.46□□□□□ -1.7
R3HDM1-218ENST00000487294 IGKV3D-15A0A087WSY6 115 aa4.45□□□□□ -1.7
R3HDM1-218ENST00000487294 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.45□□□□□ -1.7
R3HDM1-218ENST00000487294 UQCRHLA0A096LP55 91 aa4.45□□□□□ -1.7
R3HDM1-218ENST00000487294 GXYLT2A0PJZ3 443 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms