RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 SLC17A5Q9NRA2 495 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 MED17Q9NVC6 651 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 PCDHA9Q9Y5H5 950 aa10.06□□□□□ -0.8
TRIM56-204ENST00000487252 DNAH3Q8TD57 4116 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 PIP5K1BO14986 540 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 GMFGO60234 142 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 CYTIPO60759 359 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 ERAL1O75616 437 aaKnown RBP10.05□□□□□ -0.8
TRIM56-204ENST00000487252 ESRRBO95718 433 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 UROSP10746 265 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 LBPP18428 481 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 TSPAN8P19075 237 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 GATA3P23771 443 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 ELK4P28324 431 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 SFTPDP35247 375 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 CLK3P49761 638 aaKnown RBP10.05□□□□□ -0.8
TRIM56-204ENST00000487252 CLNS1AP54105 237 aaKnown RBP10.05□□□□□ -0.8
TRIM56-204ENST00000487252 FOXA1P55317 472 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 FAM189A2Q15884 450 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 TAF9Q16594 264 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 GSTA3Q16772 222 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 COQ5Q5HYK3 327 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 ZNF362Q5T0B9 420 aaPredicted RBP10.05□□□□□ -0.8
TRIM56-204ENST00000487252 OLFML2AQ68BL7 652 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 REP15Q6BDI9 236 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 ACSM5Q6NUN0 579 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 METTL2BQ6P1Q9 378 aaKnown RBP10.05□□□□□ -0.8
TRIM56-204ENST00000487252 ZFP1Q6P2D0 407 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 RNF165Q6ZSG1 346 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 LRRC70Q7Z2Q7 622 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 GALNT5Q7Z7M9 940 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 FUNDC1Q8IVP5 155 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 ZNF100Q8IYN0 542 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 SLC26A7Q8TE54 656 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 UBTD2Q8WUN7 234 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 PYDC1Q8WXC3 89 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 DUS3LQ96G46 650 aaKnown RBP10.05□□□□□ -0.8
TRIM56-204ENST00000487252 ZNF382Q96SR6 550 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 ZNF184Q99676 751 aaPredicted RBP10.05□□□□□ -0.8
TRIM56-204ENST00000487252 GPA33Q99795 319 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 CCT7Q99832 543 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 ECSITQ9BQ95 431 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 CD244Q9BZW8 370 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 SDR39U1Q9NRG7 319 aaPredicted RBP10.05□□□□□ -0.8
TRIM56-204ENST00000487252 CD300AQ9UGN4 299 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 ZNF225Q9UK10 706 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 AMDHD2Q9Y303 409 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 FIS1Q9Y3D6 152 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 OR10H1Q9Y4A9 318 aa10.05□□□□□ -0.8
TRIM56-204ENST00000487252 IGHV3-15A0A0B4J1V0 119 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 C1orf226A1L170 272 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 C9JVG2 144 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 H0YIV9 168 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 MRASO14807 208 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 DEAF1O75398 565 aaPredicted RBP10.04□□□□□ -0.8
TRIM56-204ENST00000487252 SEMA3DO95025 777 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 MPZL1O95297 269 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 IGHV3-9P01782 118 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 LINGO3P0C6S8 592 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 SELEP16581 610 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 TMEM33P57088 247 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 RAC3P60763 192 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 STX1BP61266 288 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 MS4A2Q01362 244 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 TRAP1Q12931 704 aaKnown RBP10.04□□□□□ -0.8
TRIM56-204ENST00000487252 ADRM1Q16186 407 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 SPATS1Q496A3 300 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 OGFRL1Q5TC84 451 aaPredicted RBP10.04□□□□□ -0.8
TRIM56-204ENST00000487252 C1orf162Q8NEQ5 155 aaPredicted RBP10.04□□□□□ -0.8
TRIM56-204ENST00000487252 FBXO30Q8TB52 745 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 SLC9A6Q92581 669 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 ZNF775Q96BV0 537 aaPredicted RBP10.04□□□□□ -0.8
TRIM56-204ENST00000487252 ROPN1LQ96C74 230 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 CCDC124Q96CT7 223 aaKnown RBP10.04□□□□□ -0.8
TRIM56-204ENST00000487252 MRGPRX4Q96LA9 322 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 KLHDC3Q9BQ90 382 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 TBL1XR1Q9BZK7 514 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 VCX3BQ9H321 246 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 C7orf69Q9H7B7 122 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 YY1AP1Q9H869 796 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 BEX1Q9HBH7 125 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 PFDN4Q9NQP4 134 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 AIG1Q9NVV5 245 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 ASB6Q9NWX5 421 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 ZNF69Q9UC07 566 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 TESQ9UGI8 421 aaKnown RBP10.04□□□□□ -0.8
TRIM56-204ENST00000487252 ADAM29Q9UKF5 820 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 NDUFAF1Q9Y375 327 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 PCDHGA11Q9Y5H2 935 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 TNPO3Q9Y5L0 923 aaKnown RBP10.04□□□□□ -0.8
TRIM56-204ENST00000487252 GPR45Q9Y5Y3 372 aa10.04□□□□□ -0.8
TRIM56-204ENST00000487252 HYDINQ4G0P3 5121 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 IGKV3D-15A0A087WSY6 115 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 IGHV1-18A0A0C4DH31 117 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 PRSS51A0A1B0GVH4 220 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 A6NHS1 94 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 hCG_2039718K7EN88 272 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 PLOD3O60568 738 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 BAG2O95816 211 aa10.03□□□□□ -0.8
TRIM56-204ENST00000487252 IDO1P14902 403 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms