RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 RABL2AQ9UBK7 228 aaPredicted RBP23.91■■□□□ 1.42
HLA-C-208ENST00000487245 RABL2BQ9UNT1 228 aa23.91■■□□□ 1.42
HLA-C-208ENST00000487245 UBL3O95164 117 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 GYPBP06028 91 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 UCHL1P09936 223 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 PITPNAQ00169 270 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 SRSF5Q13243 272 aaKnown RBP23.9■■□□□ 1.42
HLA-C-208ENST00000487245 CCDC58Q4VC31 144 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 SLC35D3Q5M8T2 416 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 RPL22L1Q6P5R6 122 aaKnown RBP23.9■■□□□ 1.42
HLA-C-208ENST00000487245 OGFOD3Q6PK18 319 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 OVCH1Q7RTY7 1134 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 ARSGQ96EG1 525 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 PELI1Q96FA3 418 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 MRPL48Q96GC5 212 aaKnown RBP23.9■■□□□ 1.42
HLA-C-208ENST00000487245 TGM7Q96PF1 710 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 ARPC3O15145 178 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 EEF1E1O43324 174 aaKnown RBP23.9■■□□□ 1.42
HLA-C-208ENST00000487245 ALX3O95076 343 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 HIST1H1CP16403 213 aaKnown RBP23.9■■□□□ 1.42
HLA-C-208ENST00000487245 ADH7P40394 386 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 DIO1P49895 249 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 GDI2P50395 445 aaKnown RBP23.9■■□□□ 1.42
HLA-C-208ENST00000487245 SLC36A2Q495M3 483 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 KLHL26Q53HC5 615 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 UNQ9370/PRO34162Q6UXP9 181 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 DPY19L2P2Q6ZN68 376 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 SLITRK4Q8IW52 837 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 SLC35F2Q8IXU6 374 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 FAM98AQ8NCA5 519 aaKnown RBP23.9■■□□□ 1.42
HLA-C-208ENST00000487245 OR14A16Q8NHC5 309 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 DDOQ99489 341 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 MRPL39Q9NYK5 338 aaKnown RBP23.9■■□□□ 1.42
HLA-C-208ENST00000487245 MMACHCQ9Y4U1 282 aa23.9■■□□□ 1.42
HLA-C-208ENST00000487245 A0A1B0GTQ1 180 aa23.89■■□□□ 1.41
HLA-C-208ENST00000487245 CD1CP29017 333 aa23.89■■□□□ 1.41
HLA-C-208ENST00000487245 MMP15P51511 669 aa23.89■■□□□ 1.41
HLA-C-208ENST00000487245 EPHA4P54764 986 aa23.89■■□□□ 1.41
HLA-C-208ENST00000487245 DBPQ10586 325 aaPredicted RBP23.89■■□□□ 1.41
HLA-C-208ENST00000487245 CEP78Q5JTW2 689 aa23.89■■□□□ 1.41
HLA-C-208ENST00000487245 ASB18Q6ZVZ8 466 aa23.89■■□□□ 1.41
HLA-C-208ENST00000487245 MED25Q71SY5 747 aa23.89■■□□□ 1.41
HLA-C-208ENST00000487245 GHDCQ8N2G8 530 aa23.89■■□□□ 1.41
HLA-C-208ENST00000487245 ZNF527Q8NB42 609 aa23.89■■□□□ 1.41
HLA-C-208ENST00000487245 C7orf57Q8NEG2 295 aa23.89■■□□□ 1.41
HLA-C-208ENST00000487245 OR4C3Q8NH37 302 aa23.89■■□□□ 1.41
HLA-C-208ENST00000487245 THAP4Q8WY91 577 aa23.89■■□□□ 1.41
HLA-C-208ENST00000487245 C7orf50Q9BRJ6 194 aaKnown RBP23.89■■□□□ 1.41
HLA-C-208ENST00000487245 ZNF337Q9Y3M9 751 aa23.89■■□□□ 1.41
HLA-C-208ENST00000487245 IGHV5-51A0A0C4DH38 117 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 DHFRP00374 187 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 IGF2P01344 180 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 EPXP11678 715 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 IGFBP4P22692 258 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 HNRNPKP61978 463 aaKnown RBP eCLIP23.88■■□□□ 1.41
HLA-C-208ENST00000487245 SIRPAP78324 504 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 HSF2Q03933 536 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 NTRK2Q16620 822 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 TP53I3Q53FA7 332 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 RFLNBQ8N5W9 214 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 SDR9C7Q8NEX9 313 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 OR4K13Q8NH42 304 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 RPS4Y2Q8TD47 263 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 SMAP2Q8WU79 429 aaPredicted RBP23.88■■□□□ 1.41
HLA-C-208ENST00000487245 ZMYND19Q96E35 227 aaPredicted RBP23.88■■□□□ 1.41
HLA-C-208ENST00000487245 SCMH1Q96GD3 660 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 SPRTNQ9H040 489 aaPredicted RBP23.88■■□□□ 1.41
HLA-C-208ENST00000487245 DPAGT1Q9H3H5 408 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 KLHL1Q9NR64 748 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 IER3IP1Q9Y5U9 82 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 NUBP2Q9Y5Y2 271 aa23.88■■□□□ 1.41
HLA-C-208ENST00000487245 A0A1W2PRG6 482 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 LMO7DNF2Z398 122 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 FLRT2O43155 660 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 TMEM127O75204 238 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 ZNF780AO75290 641 aaPredicted RBP23.87■■□□□ 1.41
HLA-C-208ENST00000487245 RPS11P62280 158 aaKnown RBP eCLIP23.87■■□□□ 1.41
HLA-C-208ENST00000487245 MRPL28Q13084 256 aaKnown RBP23.87■■□□□ 1.41
HLA-C-208ENST00000487245 IL10RAQ13651 578 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 HSD17B12Q53GQ0 312 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 YIPF5Q969M3 257 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 NMNAT2Q9BZQ4 307 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 COPZ2Q9P299 210 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 CAMK2AQ9UQM7 478 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 BRWD1Q9NSI6 2320 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 MCIDASD6RGH6 385 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 CTDSPLO15194 276 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 GSTZ1O43708 216 aaPredicted RBP23.87■■□□□ 1.41
HLA-C-208ENST00000487245 GPRIN2O60269 458 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 OR7A10O76100 309 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 CLPSP04118 112 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 ATF1P18846 271 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 GFERP55789 205 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 PON3Q15166 354 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 C14orf28Q4W4Y0 310 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 THOC7Q6I9Y2 204 aaKnown RBP23.87■■□□□ 1.41
HLA-C-208ENST00000487245 DEFB119Q8N690 84 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 OR13C5Q8NGS8 318 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 OR5H6Q8NGV6 325 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 GPX7Q96SL4 187 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms