RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 PRPS2P11908 318 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 BCKDHAP12694 445 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 IGLL1P15814 213 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 STMN1P16949 149 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 MAP3K8P41279 467 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 SESN3P58005 492 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 MGAT5Q09328 741 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 CBFBQ13951 182 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 SLC17A1Q14916 467 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 MMEL1Q495T6 779 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 PGBD2Q6P3X8 592 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 ZNF614Q8N883 585 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 ZIC4Q8N9L1 334 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 CDC26Q8NHZ8 85 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 TBC1D15Q8TC07 691 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 MAIP1Q8WWC4 291 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 UPRTQ96BW1 309 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 FAM71F1Q96KD3 344 aaPredicted RBP10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 ALKBH3Q96Q83 286 aaPredicted RBP10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 DIRC2Q96SL1 478 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 OR11A1Q9GZK7 315 aa10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 NKX1-2Q9UD57 310 aaPredicted RBP10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 POLR3KQ9Y2Y1 108 aaPredicted RBP10.24□□□□□ -0.77
ATPAF1-205ENST00000487193 DNAH7Q8WXX0 4024 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 PCDH7O60245 1069 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 CCNA2P20248 432 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 MSX2P35548 267 aaPredicted RBP10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 SERPINB4P48594 390 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 RAE1P78406 368 aaKnown RBP10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 LCP2Q13094 533 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 HNRNPA0Q13151 305 aaKnown RBP10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 LARS2Q15031 903 aaKnown RBP10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 DUSP5Q16690 384 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 TRMT5Q32P41 509 aaKnown RBP10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 NSUN5P1Q3KNT7 163 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 PCGF3Q3KNV8 242 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 KLHL26Q53HC5 615 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 SZRD1Q7Z422 152 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 KIF18AQ8NI77 898 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 SSMEM1Q8WWF3 244 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 SELENOMQ8WWX9 145 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 TMEM45BQ96B21 275 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 AMDHD1Q96NU7 426 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 TSPAN32Q96QS1 320 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 NAA11Q9BSU3 229 aaPredicted RBP10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 NMRAL1Q9HBL8 299 aa10.23□□□□□ -0.77
ATPAF1-205ENST00000487193 TMEM229AB2RXF0 380 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 ETV2O00321 342 aaPredicted RBP10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 UPK3AO75631 287 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 IGHV4-59P01825 116 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 HOXB1P14653 301 aaPredicted RBP10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 MAKP20794 623 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 TYK2P29597 1187 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 NTSP30990 170 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 LCN1P31025 176 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 SLC6A9P48067 706 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 ARF1P84077 181 aaKnown RBP10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 H3F3AP84243 136 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 GALK2Q01415 458 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 C2orf80Q0P641 193 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 BST1Q10588 318 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 COX18Q8N8Q8 333 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 CDRT4Q8N9R6 151 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 OR4S1Q8NGB4 309 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 SLC25A43Q8WUT9 341 aaPredicted RBP10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 SNX33Q8WV41 574 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 CHMP6Q96FZ7 201 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 ZNF317Q96PQ6 595 aaPredicted RBP10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 DCLRE1CQ96SD1 692 aaKnown RBP10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 EBPLQ9BY08 206 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 NMUR2Q9GZQ4 415 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 MMP28Q9H239 520 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 SAP30LQ9HAJ7 183 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 NPHS2Q9NP85 383 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 CTPS2Q9NRF8 586 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 NMRK1Q9NWW6 199 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 VPS29Q9UBQ0 182 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 OR5V1Q9UGF6 321 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 FOXJ3Q9UPW0 622 aa10.22□□□□□ -0.77
ATPAF1-205ENST00000487193 ZNF264O43296 627 aa10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 RSL1D1O76021 490 aaKnown RBP10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 ZNF35P13682 527 aa10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 IVDP26440 423 aa10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 FNTAP49354 379 aa10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 SELENOPP49908 381 aa10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 ALDH18A1P54886 795 aaKnown RBP10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 PCBP3P57721 371 aaKnown RBP10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 KRTAP10-11P60412 298 aa10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 RPS23P62266 143 aaKnown RBP10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 HSPB3Q12988 150 aa10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 STEAP4Q687X5 459 aa10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 CDC73Q6P1J9 531 aa10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 RAPH1Q70E73 1250 aa10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 ZNF551Q7Z340 670 aaPredicted RBP10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 ANKMY2Q8IV38 441 aa10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 OR9K2Q8NGE7 335 aa10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 HOXB13Q92826 284 aaPredicted RBP10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 TMEM181Q9P2C4 612 aa10.21□□□□□ -0.77
ATPAF1-205ENST00000487193 GPR160Q9UJ42 338 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms